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Items: 1 to 20 of 46

1.

The structure of the eukaryotic ribosome at 3.0 Å resolution.

Ben-Shem A, Garreau de Loubresse N, Melnikov S, Jenner L, Yusupova G, Yusupov M.

Science. 2011 Dec 16;334(6062):1524-9. doi: 10.1126/science.1212642. Epub 2011 Nov 17.

2.

Depletion of eIF4G from yeast cells narrows the range of translational efficiencies genome-wide.

Park EH, Zhang F, Warringer J, Sunnerhagen P, Hinnebusch AG.

BMC Genomics. 2011 Jan 26;12:68. doi: 10.1186/1471-2164-12-68.

3.

Function of a retrotransposon nucleocapsid protein.

Sandmeyer SB, Clemens KA.

RNA Biol. 2010 Nov-Dec;7(6):642-54. Epub 2010 Nov 1. Review.

4.

Multiple elements in the eIF4G1 N-terminus promote assembly of eIF4G1•PABP mRNPs in vivo.

Park EH, Walker SE, Lee JM, Rothenburg S, Lorsch JR, Hinnebusch AG.

EMBO J. 2011 Jan 19;30(2):302-16. doi: 10.1038/emboj.2010.312. Epub 2010 Dec 7.

5.

Identification of RNA recognition elements in the Saccharomyces cerevisiae transcriptome.

Riordan DP, Herschlag D, Brown PO.

Nucleic Acids Res. 2011 Mar;39(4):1501-9. doi: 10.1093/nar/gkq920. Epub 2010 Oct 18.

6.

The mRNA landscape at yeast translation initiation sites.

Robbins-Pianka A, Rice MD, Weir MP.

Bioinformatics. 2010 Nov 1;26(21):2651-5. doi: 10.1093/bioinformatics/btq509. Epub 2010 Sep 6.

PMID:
20819958
7.

Genome-wide measurement of RNA secondary structure in yeast.

Kertesz M, Wan Y, Mazor E, Rinn JL, Nutter RC, Chang HY, Segal E.

Nature. 2010 Sep 2;467(7311):103-7. doi: 10.1038/nature09322.

8.

Identifying eIF4E-binding protein translationally-controlled transcripts reveals links to mRNAs bound by specific PUF proteins.

Cridge AG, Castelli LM, Smirnova JB, Selley JN, Rowe W, Hubbard SJ, McCarthy JE, Ashe MP, Grant CM, Pavitt GD.

Nucleic Acids Res. 2010 Dec;38(22):8039-50. doi: 10.1093/nar/gkq686. Epub 2010 Aug 12.

9.

ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids.

Ashkenazy H, Erez E, Martz E, Pupko T, Ben-Tal N.

Nucleic Acids Res. 2010 Jul;38(Web Server issue):W529-33. doi: 10.1093/nar/gkq399. Epub 2010 May 16.

10.

Molecular view of 43 S complex formation and start site selection in eukaryotic translation initiation.

Lorsch JR, Dever TE.

J Biol Chem. 2010 Jul 9;285(28):21203-7. doi: 10.1074/jbc.R110.119743. Epub 2010 May 5. Review.

11.

Functional overlap between eIF4G isoforms in Saccharomyces cerevisiae.

Clarkson BK, Gilbert WV, Doudna JA.

PLoS One. 2010 Feb 9;5(2):e9114. doi: 10.1371/journal.pone.0009114.

12.

A universal trend of reduced mRNA stability near the translation-initiation site in prokaryotes and eukaryotes.

Gu W, Zhou T, Wilke CO.

PLoS Comput Biol. 2010 Feb 5;6(2):e1000664. doi: 10.1371/journal.pcbi.1000664.

13.

The mechanism of eukaryotic translation initiation and principles of its regulation.

Jackson RJ, Hellen CU, Pestova TV.

Nat Rev Mol Cell Biol. 2010 Feb;11(2):113-27. doi: 10.1038/nrm2838. Review.

14.

The SR protein family.

Shepard PJ, Hertel KJ.

Genome Biol. 2009;10(10):242. doi: 10.1186/gb-2009-10-10-242. Epub 2009 Oct 27. Review.

15.

Protein dynamics and conformational disorder in molecular recognition.

Mittag T, Kay LE, Forman-Kay JD.

J Mol Recognit. 2010 Mar-Apr;23(2):105-16. doi: 10.1002/jmr.961. Review. Erratum in: J Mol Recognit. 2010 Mar;23(2):258.

PMID:
19585546
16.

Regulation of translation initiation in eukaryotes: mechanisms and biological targets.

Sonenberg N, Hinnebusch AG.

Cell. 2009 Feb 20;136(4):731-45. doi: 10.1016/j.cell.2009.01.042. Review.

17.

Upstream sequence elements direct post-transcriptional regulation of gene expression under stress conditions in yeast.

Lawless C, Pearson RD, Selley JN, Smirnova JB, Grant CM, Ashe MP, Pavitt GD, Hubbard SJ.

BMC Genomics. 2009 Jan 7;10:7. doi: 10.1186/1471-2164-10-7.

18.

Diverse RNA-binding proteins interact with functionally related sets of RNAs, suggesting an extensive regulatory system.

Hogan DJ, Riordan DP, Gerber AP, Herschlag D, Brown PO.

PLoS Biol. 2008 Oct 28;6(10):e255. doi: 10.1371/journal.pbio.0060255.

19.

The transcriptional landscape of the yeast genome defined by RNA sequencing.

Nagalakshmi U, Wang Z, Waern K, Shou C, Raha D, Gerstein M, Snyder M.

Science. 2008 Jun 6;320(5881):1344-9. doi: 10.1126/science.1158441. Epub 2008 May 1.

20.

RNA association or phosphorylation of the RS domain prevents aggregation of RS domain-containing proteins.

Nikolakaki E, Drosou V, Sanidas I, Peidis P, Papamarcaki T, Iakoucheva LM, Giannakouros T.

Biochim Biophys Acta. 2008 Feb;1780(2):214-25. Epub 2007 Nov 1.

PMID:
18022399

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