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Items: 1 to 20 of 110

1.

Structural basis of initial RNA polymerase II transcription.

Cheung AC, Sainsbury S, Cramer P.

EMBO J. 2011 Nov 4;30(23):4755-63. doi: 10.1038/emboj.2011.396.

2.

Architecture of the yeast RNA polymerase II open complex and regulation of activity by TFIIF.

Fishburn J, Hahn S.

Mol Cell Biol. 2012 Jan;32(1):12-25. doi: 10.1128/MCB.06242-11. Epub 2011 Oct 24.

3.

Initiation complex structure and promoter proofreading.

Liu X, Bushnell DA, Silva DA, Huang X, Kornberg RD.

Science. 2011 Jul 29;333(6042):633-7. doi: 10.1126/science.1206629.

4.

Crystal structure of bacterial RNA polymerase bound with a transcription inhibitor protein.

Tagami S, Sekine S, Kumarevel T, Hino N, Murayama Y, Kamegamori S, Yamamoto M, Sakamoto K, Yokoyama S.

Nature. 2010 Dec 16;468(7326):978-82. doi: 10.1038/nature09573. Epub 2010 Dec 1.

PMID:
21124318
5.

A tandem SH2 domain in transcription elongation factor Spt6 binds the phosphorylated RNA polymerase II C-terminal repeat domain (CTD).

Sun M, Larivière L, Dengl S, Mayer A, Cramer P.

J Biol Chem. 2010 Dec 31;285(53):41597-603. doi: 10.1074/jbc.M110.144568. Epub 2010 Oct 6.

6.

RNA polymerase II trigger loop residues stabilize and position the incoming nucleotide triphosphate in transcription.

Huang X, Wang D, Weiss DR, Bushnell DA, Kornberg RD, Levitt M.

Proc Natl Acad Sci U S A. 2010 Sep 7;107(36):15745-50. doi: 10.1073/pnas.1009898107. Epub 2010 Aug 23.

7.

The architecture of RNA polymerase fidelity.

Kaplan CD.

BMC Biol. 2010 Jun 22;8:85. doi: 10.1186/1741-7007-8-85.

8.

Central role of the RNA polymerase trigger loop in intrinsic RNA hydrolysis.

Yuzenkova Y, Zenkin N.

Proc Natl Acad Sci U S A. 2010 Jun 15;107(24):10878-83. doi: 10.1073/pnas.0914424107. Epub 2010 Jun 1.

9.

Stepwise mechanism for transcription fidelity.

Yuzenkova Y, Bochkareva A, Tadigotla VR, Roghanian M, Zorov S, Severinov K, Zenkin N.

BMC Biol. 2010 May 7;8:54. doi: 10.1186/1741-7007-8-54.

10.
11.

Position of the general transcription factor TFIIF within the RNA polymerase II transcription preinitiation complex.

Eichner J, Chen HT, Warfield L, Hahn S.

EMBO J. 2010 Feb 17;29(4):706-16. doi: 10.1038/emboj.2009.386. Epub 2009 Dec 24.

12.

Role of the RNA polymerase trigger loop in catalysis and pausing.

Zhang J, Palangat M, Landick R.

Nat Struct Mol Biol. 2010 Jan;17(1):99-104. doi: 10.1038/nsmb.1732. Epub 2009 Dec 6.

13.

A Bre1-associated protein, large 1 (Lge1), promotes H2B ubiquitylation during the early stages of transcription elongation.

Song YH, Ahn SH.

J Biol Chem. 2010 Jan 22;285(4):2361-7. doi: 10.1074/jbc.M109.039255. Epub 2009 Nov 18.

14.

NuA4 lysine acetyltransferase Esa1 is targeted to coding regions and stimulates transcription elongation with Gcn5.

Ginsburg DS, Govind CK, Hinnebusch AG.

Mol Cell Biol. 2009 Dec;29(24):6473-87. doi: 10.1128/MCB.01033-09. Epub 2009 Oct 12.

15.

Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.

Sydow JF, Brueckner F, Cheung AC, Damsma GE, Dengl S, Lehmann E, Vassylyev D, Cramer P.

Mol Cell. 2009 Jun 26;34(6):710-21. doi: 10.1016/j.molcel.2009.06.002.

16.

Schizosacharomyces pombe RNA polymerase II at 3.6-A resolution.

Spåhr H, Calero G, Bushnell DA, Kornberg RD.

Proc Natl Acad Sci U S A. 2009 Jun 9;106(23):9185-90. doi: 10.1073/pnas.0903361106. Epub 2009 May 20.

17.

Rpb9 subunit controls transcription fidelity by delaying NTP sequestration in RNA polymerase II.

Walmacq C, Kireeva ML, Irvin J, Nedialkov Y, Lubkowska L, Malagon F, Strathern JN, Kashlev M.

J Biol Chem. 2009 Jul 17;284(29):19601-12. doi: 10.1074/jbc.M109.006908. Epub 2009 May 13.

18.

Nucleic acid polymerases use a general acid for nucleotidyl transfer.

Castro C, Smidansky ED, Arnold JJ, Maksimchuk KR, Moustafa I, Uchida A, Götte M, Konigsberg W, Cameron CE.

Nat Struct Mol Biol. 2009 Feb;16(2):212-8. doi: 10.1038/nsmb.1540. Epub 2009 Jan 18.

19.

Bridge helix and trigger loop perturbations generate superactive RNA polymerases.

Tan L, Wiesler S, Trzaska D, Carney HC, Weinzierl RO.

J Biol. 2008 Dec 2;7(10):40. doi: 10.1186/jbiol98.

20.

Sus1 is recruited to coding regions and functions during transcription elongation in association with SAGA and TREX2.

Pascual-García P, Govind CK, Queralt E, Cuenca-Bono B, Llopis A, Chavez S, Hinnebusch AG, Rodríguez-Navarro S.

Genes Dev. 2008 Oct 15;22(20):2811-22. doi: 10.1101/gad.483308.

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