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Items: 1 to 20 of 57

1.

Local synteny and codon usage contribute to asymmetric sequence divergence of Saccharomyces cerevisiae gene duplicates.

Bu L, Bergthorsson U, Katju V.

BMC Evol Biol. 2011 Sep 28;11:279. doi: 10.1186/1471-2148-11-279.

2.

Evolutionary genomics of a temperate bacteriophage in an obligate intracellular bacteria (Wolbachia).

Kent BN, Funkhouser LJ, Setia S, Bordenstein SR.

PLoS One. 2011;6(9):e24984. doi: 10.1371/journal.pone.0024984. Epub 2011 Sep 14.

3.

Regulation of Wolbachia ankyrin domain encoding genes in Drosophila gonads.

Papafotiou G, Oehler S, Savakis C, Bourtzis K.

Res Microbiol. 2011 Oct;162(8):764-72. doi: 10.1016/j.resmic.2011.06.012. Epub 2011 Jun 21.

PMID:
21726632
4.

The impact of endosymbionts on the evolution of host sex-determination mechanisms.

Cordaux R, Bouchon D, Grève P.

Trends Genet. 2011 Aug;27(8):332-41. doi: 10.1016/j.tig.2011.05.002. Epub 2011 Jun 12. Review.

PMID:
21663992
5.

MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S.

Mol Biol Evol. 2011 Oct;28(10):2731-9. doi: 10.1093/molbev/msr121. Epub 2011 May 4.

6.

Diversification of Wolbachia endosymbiont in the Culex pipiens mosquito.

Atyame CM, Delsuc F, Pasteur N, Weill M, Duron O.

Mol Biol Evol. 2011 Oct;28(10):2761-72. doi: 10.1093/molbev/msr083. Epub 2011 Apr 22.

PMID:
21515811
7.

Multiple Wolbachia determinants control the evolution of cytoplasmic incompatibilities in Culex pipiens mosquito populations.

Atyame CM, Duron O, Tortosa P, Pasteur N, Fort P, Weill M.

Mol Ecol. 2011 Jan;20(2):286-98. doi: 10.1111/j.1365-294X.2010.04937.x. Epub 2010 Nov 26.

PMID:
21114563
8.

Genome-wide gene expression profiling reveals aberrant MAPK and Wnt signaling pathways associated with early parthenogenesis.

Liu N, Enkemann SA, Liang P, Hersmus R, Zanazzi C, Huang J, Wu C, Chen Z, Looijenga LH, Keefe DL, Liu L.

J Mol Cell Biol. 2010 Dec;2(6):333-44. doi: 10.1093/jmcb/mjq029. Epub 2010 Oct 6.

PMID:
20926514
9.

Functional test of the influence of Wolbachia genes on cytoplasmic incompatibility expression in Drosophila melanogaster.

Yamada R, Iturbe-Ormaetxe I, Brownlie JC, O'Neill SL.

Insect Mol Biol. 2011 Feb;20(1):75-85. doi: 10.1111/j.1365-2583.2010.01042.x. Epub 2010 Sep 21.

PMID:
20854481
10.

RDP3: a flexible and fast computer program for analyzing recombination.

Martin DP, Lemey P, Lott M, Moulton V, Posada D, Lefeuvre P.

Bioinformatics. 2010 Oct 1;26(19):2462-3. doi: 10.1093/bioinformatics/btq467. Epub 2010 Aug 26.

11.

Sex and stripping: The key to the intimate relationship between Wolbachia and host?

Negri I, Pellecchia M, Grève P, Daffonchio D, Bandi C, Alma A.

Commun Integr Biol. 2010 Mar;3(2):110-5.

12.

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0.

Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, Gascuel O.

Syst Biol. 2010 May;59(3):307-21. doi: 10.1093/sysbio/syq010. Epub 2010 Mar 29.

PMID:
20525638
13.

Nuclear translocated Ehrlichia chaffeensis ankyrin protein interacts with a specific adenine-rich motif of host promoter and intronic Alu elements.

Zhu B, Nethery KA, Kuriakose JA, Wakeel A, Zhang X, McBride JW.

Infect Immun. 2009 Oct;77(10):4243-55. doi: 10.1128/IAI.00376-09. Epub 2009 Aug 3.

14.

Complete WO phage sequences reveal their dynamic evolutionary trajectories and putative functional elements required for integration into the Wolbachia genome.

Tanaka K, Furukawa S, Nikoh N, Sasaki T, Fukatsu T.

Appl Environ Microbiol. 2009 Sep;75(17):5676-86. doi: 10.1128/AEM.01172-09. Epub 2009 Jul 10.

15.

Extensive genomic diversity of closely related Wolbachia strains.

Ishmael N, Dunning Hotopp JC, Ioannidis P, Biber S, Sakamoto J, Siozios S, Nene V, Werren J, Bourtzis K, Bordenstein SR, Tettelin H.

Microbiology. 2009 Jul;155(Pt 7):2211-22. doi: 10.1099/mic.0.027581-0. Epub 2009 Apr 23.

16.

The mosaic genome structure of the Wolbachia wRi strain infecting Drosophila simulans.

Klasson L, Westberg J, Sapountzis P, Näslund K, Lutnaes Y, Darby AC, Veneti Z, Chen L, Braig HR, Garrett R, Bourtzis K, Andersson SG.

Proc Natl Acad Sci U S A. 2009 Apr 7;106(14):5725-30. doi: 10.1073/pnas.0810753106. Epub 2009 Mar 23.

17.

SMART 6: recent updates and new developments.

Letunic I, Doerks T, Bork P.

Nucleic Acids Res. 2009 Jan;37(Database issue):D229-32. doi: 10.1093/nar/gkn808. Epub 2008 Oct 31.

18.

Characterization and transcriptional analysis of two gene clusters for type IV secretion machinery in Wolbachia of Armadillidium vulgare.

Félix C, Pichon S, Braquart-Varnier C, Braig H, Chen L, Garrett RA, Martin G, Grève P.

Res Microbiol. 2008 Jul-Aug;159(6):481-5. doi: 10.1016/j.resmic.2008.05.007. Epub 2008 Jun 6.

PMID:
18582562
19.

Intense transpositional activity of insertion sequences in an ancient obligate endosymbiont.

Cordaux R, Pichon S, Ling A, Pérez P, Delaunay C, Vavre F, Bouchon D, Grève P.

Mol Biol Evol. 2008 Sep;25(9):1889-96. doi: 10.1093/molbev/msn134. Epub 2008 Jun 17.

20.

Genome evolution of Wolbachia strain wPip from the Culex pipiens group.

Klasson L, Walker T, Sebaihia M, Sanders MJ, Quail MA, Lord A, Sanders S, Earl J, O'Neill SL, Thomson N, Sinkins SP, Parkhill J.

Mol Biol Evol. 2008 Sep;25(9):1877-87. doi: 10.1093/molbev/msn133. Epub 2008 Jun 12.

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