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Items: 1 to 20 of 29

1.

Genomic ancestry of North Africans supports back-to-Africa migrations.

Henn BM, Botigué LR, Gravel S, Wang W, Brisbin A, Byrnes JK, Fadhlaoui-Zid K, Zalloua PA, Moreno-Estrada A, Bertranpetit J, Bustamante CD, Comas D.

PLoS Genet. 2012 Jan;8(1):e1002397. doi: 10.1371/journal.pgen.1002397. Epub 2012 Jan 12.

2.

Ancestral components of admixed genomes in a Mexican cohort.

Johnson NA, Coram MA, Shriver MD, Romieu I, Barsh GS, London SJ, Tang H.

PLoS Genet. 2011 Dec;7(12):e1002410. doi: 10.1371/journal.pgen.1002410. Epub 2011 Dec 15.

3.

Recombination rates in admixed individuals identified by ancestry-based inference.

Wegmann D, Kessner DE, Veeramah KR, Mathias RA, Nicolae DL, Yanek LR, Sun YV, Torgerson DG, Rafaels N, Mosley T, Becker LC, Ruczinski I, Beaty TH, Kardia SL, Meyers DA, Barnes KC, Becker DM, Freimer NB, Novembre J.

Nat Genet. 2011 Jul 20;43(9):847-53. doi: 10.1038/ng.894.

PMID:
21775992
4.

The landscape of recombination in African Americans.

Hinch AG, Tandon A, Patterson N, Song Y, Rohland N, Palmer CD, Chen GK, Wang K, Buxbaum SG, Akylbekova EL, Aldrich MC, Ambrosone CB, Amos C, Bandera EV, Berndt SI, Bernstein L, Blot WJ, Bock CH, Boerwinkle E, Cai Q, Caporaso N, Casey G, Cupples LA, Deming SL, Diver WR, Divers J, Fornage M, Gillanders EM, Glessner J, Harris CC, Hu JJ, Ingles SA, Isaacs W, John EM, Kao WH, Keating B, Kittles RA, Kolonel LN, Larkin E, Le Marchand L, McNeill LH, Millikan RC, Murphy A, Musani S, Neslund-Dudas C, Nyante S, Papanicolaou GJ, Press MF, Psaty BM, Reiner AP, Rich SS, Rodriguez-Gil JL, Rotter JI, Rybicki BA, Schwartz AG, Signorello LB, Spitz M, Strom SS, Thun MJ, Tucker MA, Wang Z, Wiencke JK, Witte JS, Wrensch M, Wu X, Yamamura Y, Zanetti KA, Zheng W, Ziegler RG, Zhu X, Redline S, Hirschhorn JN, Henderson BE, Taylor HA Jr, Price AL, Hakonarson H, Chanock SJ, Haiman CA, Wilson JG, Reich D, Myers SR.

Nature. 2011 Jul 20;476(7359):170-5. doi: 10.1038/nature10336.

5.

New approaches to disease mapping in admixed populations.

Seldin MF, Pasaniuc B, Price AL.

Nat Rev Genet. 2011 Jun 28;12(8):523-8. doi: 10.1038/nrg3002. Review.

6.

Enhanced statistical tests for GWAS in admixed populations: assessment using African Americans from CARe and a Breast Cancer Consortium.

Pasaniuc B, Zaitlen N, Lettre G, Chen GK, Tandon A, Kao WH, Ruczinski I, Fornage M, Siscovick DS, Zhu X, Larkin E, Lange LA, Cupples LA, Yang Q, Akylbekova EL, Musani SK, Divers J, Mychaleckyj J, Li M, Papanicolaou GJ, Millikan RC, Ambrosone CB, John EM, Bernstein L, Zheng W, Hu JJ, Ziegler RG, Nyante SJ, Bandera EV, Ingles SA, Press MF, Chanock SJ, Deming SL, Rodriguez-Gil JL, Palmer CD, Buxbaum S, Ekunwe L, Hirschhorn JN, Henderson BE, Myers S, Haiman CA, Reich D, Patterson N, Wilson JG, Price AL.

PLoS Genet. 2011 Apr;7(4):e1001371. doi: 10.1371/journal.pgen.1001371. Epub 2011 Apr 21.

7.

Ancestry and pharmacogenomics of relapse in acute lymphoblastic leukemia.

Yang JJ, Cheng C, Devidas M, Cao X, Fan Y, Campana D, Yang W, Neale G, Cox NJ, Scheet P, Borowitz MJ, Winick NJ, Martin PL, Willman CL, Bowman WP, Camitta BM, Carroll A, Reaman GH, Carroll WL, Loh M, Hunger SP, Pui CH, Evans WE, Relling MV.

Nat Genet. 2011 Mar;43(3):237-41. doi: 10.1038/ng.763. Epub 2011 Feb 6.

8.

Identifying signatures of natural selection in Tibetan and Andean populations using dense genome scan data.

Bigham A, Bauchet M, Pinto D, Mao X, Akey JM, Mei R, Scherer SW, Julian CG, Wilson MJ, López Herráez D, Brutsaert T, Parra EJ, Moore LG, Shriver MD.

PLoS Genet. 2010 Sep 9;6(9):e1001116. doi: 10.1371/journal.pgen.1001116.

9.

Colloquium paper: genome-wide patterns of population structure and admixture among Hispanic/Latino populations.

Bryc K, Velez C, Karafet T, Moreno-Estrada A, Reynolds A, Auton A, Hammer M, Bustamante CD, Ostrer H.

Proc Natl Acad Sci U S A. 2010 May 11;107 Suppl 2:8954-61. doi: 10.1073/pnas.0914618107. Epub 2010 May 5.

10.

Sensitive detection of chromosomal segments of distinct ancestry in admixed populations.

Price AL, Tandon A, Patterson N, Barnes KC, Rafaels N, Ruczinski I, Beaty TH, Mathias R, Reich D, Myers S.

PLoS Genet. 2009 Jun;5(6):e1000519. doi: 10.1371/journal.pgen.1000519. Epub 2009 Jun 19.

11.

Inference of locus-specific ancestry in closely related populations.

Pasaniuc B, Sankararaman S, Kimmel G, Halperin E.

Bioinformatics. 2009 Jun 15;25(12):i213-21. doi: 10.1093/bioinformatics/btp197.

12.

Genotype error detection using Hidden Markov Models of haplotype diversity.

Kennedy J, Măndoiu I, Paşaniuc B.

J Comput Biol. 2008 Nov;15(9):1155-71. doi: 10.1089/cmb.2007.0133.

PMID:
18973433
13.

Effect of genetic divergence in identifying ancestral origin using HAPAA.

Sundquist A, Fratkin E, Do CB, Batzoglou S.

Genome Res. 2008 Apr;18(4):676-82. doi: 10.1101/gr.072850.107. Epub 2008 Mar 18.

14.

Estimating local ancestry in admixed populations.

Sankararaman S, Sridhar S, Kimmel G, Halperin E.

Am J Hum Genet. 2008 Feb;82(2):290-303. doi: 10.1016/j.ajhg.2007.09.022.

15.

Recent genetic selection in the ancestral admixture of Puerto Ricans.

Tang H, Choudhry S, Mei R, Morgan M, Rodriguez-Cintron W, Burchard EG, Risch NJ.

Am J Hum Genet. 2007 Sep;81(3):626-33. Epub 2007 Aug 1.

16.

A genomewide single-nucleotide-polymorphism panel for Mexican American admixture mapping.

Tian C, Hinds DA, Shigeta R, Adler SG, Lee A, Pahl MV, Silva G, Belmont JW, Hanson RL, Knowler WC, Gregersen PK, Ballinger DG, Seldin MF.

Am J Hum Genet. 2007 Jun;80(6):1014-23.

17.

A genomewide admixture mapping panel for Hispanic/Latino populations.

Mao X, Bigham AW, Mei R, Gutierrez G, Weiss KM, Brutsaert TD, Leon-Velarde F, Moore LG, Vargas E, McKeigue PM, Shriver MD, Parra EJ.

Am J Hum Genet. 2007 Jun;80(6):1171-8. Epub 2007 Apr 20.

18.

A genomewide admixture map for Latino populations.

Price AL, Patterson N, Yu F, Cox DR, Waliszewska A, McDonald GJ, Tandon A, Schirmer C, Neubauer J, Bedoya G, Duque C, Villegas A, Bortolini MC, Salzano FM, Gallo C, Mazzotti G, Tello-Ruiz M, Riba L, Aguilar-Salinas CA, Canizales-Quinteros S, Menjivar M, Klitz W, Henderson B, Haiman CA, Winkler C, Tusie-Luna T, Ruiz-Linares A, Reich D.

Am J Hum Genet. 2007 Jun;80(6):1024-36. Epub 2007 Apr 13.

19.

Reconstructing genetic ancestry blocks in admixed individuals.

Tang H, Coram M, Wang P, Zhu X, Risch N.

Am J Hum Genet. 2006 Jul;79(1):1-12. Epub 2006 May 17.

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