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Analysis of Histone Modifications from Tryptic Peptides of Deuteroacetylated Isoforms.

Hersman E, Nelson DM, Griffith WP, Jelinek C, Cotter RJ.

Int J Mass Spectrom. 2012 Feb 15;312:5-16.


The duplicated deacetylases Sir2 and Hst1 subfunctionalized by acquiring complementary inactivating mutations.

Froyd CA, Rusche LN.

Mol Cell Biol. 2011 Aug;31(16):3351-65. doi: 10.1128/MCB.05175-11. Epub 2011 Jun 20.


H3 lysine 4 is acetylated at active gene promoters and is regulated by H3 lysine 4 methylation.

Guillemette B, Drogaris P, Lin HH, Armstrong H, Hiragami-Hamada K, Imhof A, Bonneil E, Thibault P, Verreault A, Festenstein RJ.

PLoS Genet. 2011 Mar;7(3):e1001354. doi: 10.1371/journal.pgen.1001354. Epub 2011 Mar 31.


A common telomeric gene silencing assay is affected by nucleotide metabolism.

Rossmann MP, Luo W, Tsaponina O, Chabes A, Stillman B.

Mol Cell. 2011 Apr 8;42(1):127-36. doi: 10.1016/j.molcel.2011.03.007.


Dot1 and histone H3K79 methylation in natural telomeric and HM silencing.

Takahashi YH, Schulze JM, Jackson J, Hentrich T, Seidel C, Jaspersen SL, Kobor MS, Shilatifard A.

Mol Cell. 2011 Apr 8;42(1):118-26. doi: 10.1016/j.molcel.2011.03.006.


SIRT3 substrate specificity determined by peptide arrays and machine learning.

Smith BC, Settles B, Hallows WC, Craven MW, Denu JM.

ACS Chem Biol. 2011 Feb 18;6(2):146-57. doi: 10.1021/cb100218d. Epub 2010 Nov 1.


Thiamine biosynthesis in Saccharomyces cerevisiae is regulated by the NAD+-dependent histone deacetylase Hst1.

Li M, Petteys BJ, McClure JM, Valsakumar V, Bekiranov S, Frank EL, Smith JS.

Mol Cell Biol. 2010 Jul;30(13):3329-41. doi: 10.1128/MCB.01590-09. Epub 2010 May 3.


Mammalian sirtuins: biological insights and disease relevance.

Haigis MC, Sinclair DA.

Annu Rev Pathol. 2010;5:253-95. doi: 10.1146/annurev.pathol.4.110807.092250. Review.


SIRT1-dependent regulation of chromatin and transcription: linking NAD(+) metabolism and signaling to the control of cellular functions.

Zhang T, Kraus WL.

Biochim Biophys Acta. 2010 Aug;1804(8):1666-75. doi: 10.1016/j.bbapap.2009.10.022. Epub 2009 Oct 30. Review.


Lysine acetylation targets protein complexes and co-regulates major cellular functions.

Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.

Science. 2009 Aug 14;325(5942):834-40. doi: 10.1126/science.1175371. Epub 2009 Jul 16.


Protein acetylation microarray reveals that NuA4 controls key metabolic target regulating gluconeogenesis.

Lin YY, Lu JY, Zhang J, Walter W, Dang W, Wan J, Tao SC, Qian J, Zhao Y, Boeke JD, Berger SL, Zhu H.

Cell. 2009 Mar 20;136(6):1073-84. doi: 10.1016/j.cell.2009.01.033.


Large-scale evaluation of protein reductive methylation for improving protein crystallization.

Kim Y, Quartey P, Li H, Volkart L, Hatzos C, Chang C, Nocek B, Cuff M, Osipiuk J, Tan K, Fan Y, Bigelow L, Maltseva N, Wu R, Borovilos M, Duggan E, Zhou M, Binkowski TA, Zhang RG, Joachimiak A.

Nat Methods. 2008 Oct;5(10):853-4. doi: 10.1038/nmeth1008-853. No abstract available.


Molecular characterization of propionyllysines in non-histone proteins.

Cheng Z, Tang Y, Chen Y, Kim S, Liu H, Li SS, Gu W, Zhao Y.

Mol Cell Proteomics. 2009 Jan;8(1):45-52. doi: 10.1074/mcp.M800224-MCP200. Epub 2008 Aug 26.


Comprehensive profiling of histone modifications using a label-free approach and its applications in determining structure-function relationships.

Drogaris P, Wurtele H, Masumoto H, Verreault A, Thibault P.

Anal Chem. 2008 Sep 1;80(17):6698-707. doi: 10.1021/ac800739d. Epub 2008 Aug 1.


Interplay of chromatin modifiers on a short basic patch of histone H4 tail defines the boundary of telomeric heterochromatin.

Altaf M, Utley RT, Lacoste N, Tan S, Briggs SD, Côté J.

Mol Cell. 2007 Dec 28;28(6):1002-14.


Acetyl-lysine analog peptides as mechanistic probes of protein deacetylases.

Smith BC, Denu JM.

J Biol Chem. 2007 Dec 21;282(51):37256-65. Epub 2007 Oct 19.


Sir2 deacetylates histone H3 lysine 56 to regulate telomeric heterochromatin structure in yeast.

Xu F, Zhang Q, Zhang K, Xie W, Grunstein M.

Mol Cell. 2007 Sep 21;27(6):890-900.


N-lysine propionylation controls the activity of propionyl-CoA synthetase.

Garrity J, Gardner JG, Hawse W, Wolberger C, Escalante-Semerena JC.

J Biol Chem. 2007 Oct 12;282(41):30239-45. Epub 2007 Aug 7.


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