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Repeatability and contingency in the evolution of a key innovation in phage lambda.

Meyer JR, Dobias DT, Weitz JS, Barrick JE, Quick RT, Lenski RE.

Science. 2012 Jan 27;335(6067):428-32. doi: 10.1126/science.1214449.


Complete genome sequences of rat and mouse segmented filamentous bacteria, a potent inducer of th17 cell differentiation.

Prakash T, Oshima K, Morita H, Fukuda S, Imaoka A, Kumar N, Sharma VK, Kim SW, Takahashi M, Saitou N, Taylor TD, Ohno H, Umesaki Y, Hattori M.

Cell Host Microbe. 2011 Sep 15;10(3):273-84. doi: 10.1016/j.chom.2011.08.007.


The genome of th17 cell-inducing segmented filamentous bacteria reveals extensive auxotrophy and adaptations to the intestinal environment.

Sczesnak A, Segata N, Qin X, Gevers D, Petrosino JF, Huttenhower C, Littman DR, Ivanov II.

Cell Host Microbe. 2011 Sep 15;10(3):260-72. doi: 10.1016/j.chom.2011.08.005.


The lifestyle of the segmented filamentous bacterium: a non-culturable gut-associated immunostimulating microbe inferred by whole-genome sequencing.

Kuwahara T, Ogura Y, Oshima K, Kurokawa K, Ooka T, Hirakawa H, Itoh T, Nakayama-Imaohji H, Ichimura M, Itoh K, Ishifune C, Maekawa Y, Yasutomo K, Hattori M, Hayashi T.

DNA Res. 2011 Aug;18(4):291-303. doi: 10.1093/dnares/dsr022. Epub 2011 Jul 26.


Molecular mechanisms of epistasis within and between genes.

Lehner B.

Trends Genet. 2011 Aug;27(8):323-31. doi: 10.1016/j.tig.2011.05.007. Epub 2011 Jun 22. Review.


Cholera- and anthrax-like toxins are among several new ADP-ribosyltransferases.

Fieldhouse RJ, Turgeon Z, White D, Merrill AR.

PLoS Comput Biol. 2010 Dec 9;6(12):e1001029. doi: 10.1371/journal.pcbi.1001029.


SmashCell: a software framework for the analysis of single-cell amplified genome sequences.

Harrington ED, Arumugam M, Raes J, Bork P, Relman DA.

Bioinformatics. 2010 Dec 1;26(23):2979-80. doi: 10.1093/bioinformatics/btq564. Epub 2010 Oct 21.


When does coevolution promote diversification?

Yoder JB, Nuismer SL.

Am Nat. 2010 Dec;176(6):802-17. doi: 10.1086/657048. Epub 2010 Oct 15.


Characterization of a Staphylococcus aureus surface virulence factor that promotes resistance to oxidative killing and infectious endocarditis.

Malachowa N, Kohler PL, Schlievert PM, Chuang ON, Dunny GM, Kobayashi SD, Miedzobrodzki J, Bohach GA, Seo KS.

Infect Immun. 2011 Jan;79(1):342-52. doi: 10.1128/IAI.00736-10. Epub 2010 Oct 11.


Staphylococcal major autolysin (Atl) is involved in excretion of cytoplasmic proteins.

Pasztor L, Ziebandt AK, Nega M, Schlag M, Haase S, Franz-Wachtel M, Madlung J, Nordheim A, Heinrichs DE, Götz F.

J Biol Chem. 2010 Nov 19;285(47):36794-803. doi: 10.1074/jbc.M110.167312. Epub 2010 Sep 16.


Functional and phenotypic characterization of a protein from Lactobacillus acidophilus involved in cell morphology, stress tolerance and adherence to intestinal cells.

O'Flaherty SJ, Klaenhammer TR.

Microbiology. 2010 Nov;156(Pt 11):3360-7. doi: 10.1099/mic.0.043158-0. Epub 2010 Sep 9.


Proinflammatory T-cell responses to gut microbiota promote experimental autoimmune encephalomyelitis.

Lee YK, Menezes JS, Umesaki Y, Mazmanian SK.

Proc Natl Acad Sci U S A. 2011 Mar 15;108 Suppl 1:4615-22. doi: 10.1073/pnas.1000082107. Epub 2010 Jul 26.


Gut-residing segmented filamentous bacteria drive autoimmune arthritis via T helper 17 cells.

Wu HJ, Ivanov II, Darce J, Hattori K, Shima T, Umesaki Y, Littman DR, Benoist C, Mathis D.

Immunity. 2010 Jun 25;32(6):815-27. doi: 10.1016/j.immuni.2010.06.001.


Modulation of the arginase pathway in the context of microbial pathogenesis: a metabolic enzyme moonlighting as an immune modulator.

Das P, Lahiri A, Lahiri A, Chakravortty D.

PLoS Pathog. 2010 Jun 17;6(6):e1000899. doi: 10.1371/journal.ppat.1000899. Review.


TLR5 signaling stimulates the innate production of IL-17 and IL-22 by CD3(neg)CD127+ immune cells in spleen and mucosa.

Van Maele L, Carnoy C, Cayet D, Songhet P, Dumoutier L, Ferrero I, Janot L, Erard F, Bertout J, Leger H, Sebbane F, Benecke A, Renauld JC, Hardt WD, Ryffel B, Sirard JC.

J Immunol. 2010 Jul 15;185(2):1177-85. doi: 10.4049/jimmunol.1000115. Epub 2010 Jun 21.


Mucosal adjuvant activity of cholera toxin requires Th17 cells and protects against inhalation anthrax.

Datta SK, Sabet M, Nguyen KP, Valdez PA, Gonzalez-Navajas JM, Islam S, Mihajlov I, Fierer J, Insel PA, Webster NJ, Guiney DG, Raz E.

Proc Natl Acad Sci U S A. 2010 Jun 8;107(23):10638-43. doi: 10.1073/pnas.1002348107. Epub 2010 May 17.


An epigenetic switch governing daughter cell separation in Bacillus subtilis.

Chai Y, Norman T, Kolter R, Losick R.

Genes Dev. 2010 Apr 15;24(8):754-65. doi: 10.1101/gad.1915010. Epub 2010 Mar 29.


Structural basis of cell wall cleavage by a staphylococcal autolysin.

Zoll S, Pätzold B, Schlag M, Götz F, Kalbacher H, Stehle T.

PLoS Pathog. 2010 Mar 12;6(3):e1000807. doi: 10.1371/journal.ppat.1000807.


Studies on the antibacterial properties of the bile acids and some compounds derived from cholanic acid.


Proc R Soc Med. 1947 Sep 30;134(877):523-37. No abstract available.


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