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Global genome organization mediated by RNA polymerase III-transcribed genes in fission yeast.

Iwasaki O, Noma K.

Gene. 2012 Feb 10;493(2):195-200. doi: 10.1016/j.gene.2010.12.011. Epub 2010 Dec 30. Review.


tRNA biology charges to the front.

Phizicky EM, Hopper AK.

Genes Dev. 2010 Sep 1;24(17):1832-60. doi: 10.1101/gad.1956510. Review.


A three-dimensional model of the yeast genome.

Duan Z, Andronescu M, Schutz K, McIlwain S, Kim YJ, Lee C, Shendure J, Fields S, Blau CA, Noble WS.

Nature. 2010 May 20;465(7296):363-7. doi: 10.1038/nature08973. Epub 2010 May 2.


Genomic binding profiles of functionally distinct RNA polymerase III transcription complexes in human cells.

Moqtaderi Z, Wang J, Raha D, White RJ, Snyder M, Weng Z, Struhl K.

Nat Struct Mol Biol. 2010 May;17(5):635-40. doi: 10.1038/nsmb.1794. Epub 2010 Apr 25.


Human RNA polymerase III transcriptomes and relationships to Pol II promoter chromatin and enhancer-binding factors.

Oler AJ, Alla RK, Roberts DN, Wong A, Hollenhorst PC, Chandler KJ, Cassiday PA, Nelson CA, Hagedorn CH, Graves BJ, Cairns BR.

Nat Struct Mol Biol. 2010 May;17(5):620-8. doi: 10.1038/nsmb.1801. Epub 2010 Apr 25.


Centromeric localization of dispersed Pol III genes in fission yeast.

Iwasaki O, Tanaka A, Tanizawa H, Grewal SI, Noma K.

Mol Biol Cell. 2010 Jan 15;21(2):254-65. doi: 10.1091/mbc.E09-09-0790. Epub 2009 Nov 12.


The effect of replication initiation on gene amplification in the rDNA and its relationship to aging.

Ganley AR, Ide S, Saka K, Kobayashi T.

Mol Cell. 2009 Sep 11;35(5):683-93. doi: 10.1016/j.molcel.2009.07.012.


Global identification of yeast chromosome interactions using Genome conformation capture.

Rodley CD, Bertels F, Jones B, O'Sullivan JM.

Fungal Genet Biol. 2009 Nov;46(11):879-86. doi: 10.1016/j.fgb.2009.07.006. Epub 2009 Jul 21.


Repeated elements coordinate the spatial organization of the yeast genome.

O'Sullivan JM, Sontam DM, Grierson R, Jones B.

Yeast. 2009 Feb;26(2):125-38. doi: 10.1002/yea.1657.


Association between active genes occurs at nuclear speckles and is modulated by chromatin environment.

Brown JM, Green J, das Neves RP, Wallace HA, Smith AJ, Hughes J, Gray N, Taylor S, Wood WG, Higgs DR, Iborra FJ, Buckle VJ.

J Cell Biol. 2008 Sep 22;182(6):1083-97. doi: 10.1083/jcb.200803174.


Identification of cis-acting sites for condensin loading onto budding yeast chromosomes.

D'Ambrosio C, Schmidt CK, Katou Y, Kelly G, Itoh T, Shirahige K, Uhlmann F.

Genes Dev. 2008 Aug 15;22(16):2215-27. doi: 10.1101/gad.1675708.


Clustering of yeast tRNA genes is mediated by specific association of condensin with tRNA gene transcription complexes.

Haeusler RA, Pratt-Hyatt M, Good PD, Gipson TA, Engelke DR.

Genes Dev. 2008 Aug 15;22(16):2204-14. doi: 10.1101/gad.1675908.


Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions.

Lanctôt C, Cheutin T, Cremer M, Cavalli G, Cremer T.

Nat Rev Genet. 2007 Feb;8(2):104-15. Review.


Nutrient starvation promotes condensin loading to maintain rDNA stability.

Tsang CK, Li H, Zheng XS.

EMBO J. 2007 Jan 24;26(2):448-58. Epub 2007 Jan 4.


The locus control region is required for association of the murine beta-globin locus with engaged transcription factories during erythroid maturation.

Ragoczy T, Bender MA, Telling A, Byron R, Groudine M.

Genes Dev. 2006 Jun 1;20(11):1447-57. Epub 2006 May 16.


Chromosome territories--a functional nuclear landscape.

Cremer T, Cremer M, Dietzel S, Müller S, Solovei I, Fakan S.

Curr Opin Cell Biol. 2006 Jun;18(3):307-16. Epub 2006 May 9. Review.


Coregulated human globin genes are frequently in spatial proximity when active.

Brown JM, Leach J, Reittie JE, Atzberger A, Lee-Prudhoe J, Wood WG, Higgs DR, Iborra FJ, Buckle VJ.

J Cell Biol. 2006 Jan 16;172(2):177-87.


Silencing near tRNA genes requires nucleolar localization.

Wang L, Haeusler RA, Good PD, Thompson M, Nagar S, Engelke DR.

J Biol Chem. 2005 Mar 11;280(10):8637-9. Epub 2005 Jan 15.

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