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Items: 1 to 20 of 191

1.

Study of FoxA pioneer factor at silent genes reveals Rfx-repressed enhancer at Cdx2 and a potential indicator of esophageal adenocarcinoma development.

Watts JA, Zhang C, Klein-Szanto AJ, Kormish JD, Fu J, Zhang MQ, Zaret KS.

PLoS Genet. 2011 Sep;7(9):e1002277. doi: 10.1371/journal.pgen.1002277. Epub 2011 Sep 15.

2.

Dynamic exchange at regulatory elements during chromatin remodeling underlies assisted loading mechanism.

Voss TC, Schiltz RL, Sung MH, Yen PM, Stamatoyannopoulos JA, Biddie SC, Johnson TA, Miranda TB, John S, Hager GL.

Cell. 2011 Aug 19;146(4):544-54. doi: 10.1016/j.cell.2011.07.006. Epub 2011 Aug 11.

3.

Targeting androgen receptor in estrogen receptor-negative breast cancer.

Ni M, Chen Y, Lim E, Wimberly H, Bailey ST, Imai Y, Rimm DL, Liu XS, Brown M.

Cancer Cell. 2011 Jul 12;20(1):119-31. doi: 10.1016/j.ccr.2011.05.026.

4.

Androgen receptor driven transcription in molecular apocrine breast cancer is mediated by FoxA1.

Robinson JL, Macarthur S, Ross-Innes CS, Tilley WD, Neal DE, Mills IG, Carroll JS.

EMBO J. 2011 Jun 24;30(15):3019-27. doi: 10.1038/emboj.2011.216. Erratum in: EMBO J. 2012 Mar 21;31(6):1617.

5.

Mechanisms of nuclear reprogramming by eggs and oocytes: a deterministic process?

Jullien J, Pasque V, Halley-Stott RP, Miyamoto K, Gurdon JB.

Nat Rev Mol Cell Biol. 2011 Jun 23;12(7):453-9. doi: 10.1038/nrm3140. Review.

6.

The nucleosome map of the mammalian liver.

Li Z, Schug J, Tuteja G, White P, Kaestner KH.

Nat Struct Mol Biol. 2011 Jun;18(6):742-6. doi: 10.1038/nsmb.2060. Epub 2011 May 29.

7.

Determinants of nucleosome organization in primary human cells.

Valouev A, Johnson SM, Boyd SD, Smith CL, Fire AZ, Sidow A.

Nature. 2011 May 22;474(7352):516-20. doi: 10.1038/nature10002.

8.

A packing mechanism for nucleosome organization reconstituted across a eukaryotic genome.

Zhang Z, Wippo CJ, Wal M, Ward E, Korber P, Pugh BF.

Science. 2011 May 20;332(6032):977-80. doi: 10.1126/science.1200508.

9.

More on FOX News: FOXA1 on the horizon of estrogen receptor function and endocrine response.

Fu X, Huang C, Schiff R.

Breast Cancer Res. 2011 Apr 20;13(2):307. doi: 10.1186/bcr2849.

10.

Reprogramming transcription by distinct classes of enhancers functionally defined by eRNA.

Wang D, Garcia-Bassets I, Benner C, Li W, Su X, Zhou Y, Qiu J, Liu W, Kaikkonen MU, Ohgi KA, Glass CK, Rosenfeld MG, Fu XD.

Nature. 2011 May 15;474(7351):390-4. doi: 10.1038/nature10006.

11.

AP-2γ regulates oestrogen receptor-mediated long-range chromatin interaction and gene transcription.

Tan SK, Lin ZH, Chang CW, Varang V, Chng KR, Pan YF, Yong EL, Sung WK, Cheung E.

EMBO J. 2011 May 13;30(13):2569-81. doi: 10.1038/emboj.2011.151. Erratum in: EMBO J. 2011;30(13):2750. Sung, Win King [corrected to Sung, Wing Kin].

12.

GATA4 regulates estrogen receptor-alpha-mediated osteoblast transcription.

Miranda-Carboni GA, Guemes M, Bailey S, Anaya E, Corselli M, Peault B, Krum SA.

Mol Endocrinol. 2011 Jul;25(7):1126-36. doi: 10.1210/me.2010-0463. Epub 2011 May 12.

13.

Induction of functional hepatocyte-like cells from mouse fibroblasts by defined factors.

Huang P, He Z, Ji S, Sun H, Xiang D, Liu C, Hu Y, Wang X, Hui L.

Nature. 2011 May 11;475(7356):386-9. doi: 10.1038/nature10116.

PMID:
21562492
14.

Nuclear mobility and mitotic chromosome binding: similarities between pioneer transcription factor FoxA and linker histone H1.

Zaret KS, Caravaca JM, Tulin A, Sekiya T.

Cold Spring Harb Symp Quant Biol. 2010;75:219-26. doi: 10.1101/sqb.2010.75.061. Epub 2011 Apr 18.

PMID:
21502411
15.

The role of chromatin accessibility in directing the widespread, overlapping patterns of Drosophila transcription factor binding.

Li XY, Thomas S, Sabo PJ, Eisen MB, Stamatoyannopoulos JA, Biggin MD.

Genome Biol. 2011;12(4):R34. doi: 10.1186/gb-2011-12-4-r34. Epub 2011 Apr 7.

16.

A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression.

Wang KC, Yang YW, Liu B, Sanyal A, Corces-Zimmerman R, Chen Y, Lajoie BR, Protacio A, Flynn RA, Gupta RA, Wysocka J, Lei M, Dekker J, Helms JA, Chang HY.

Nature. 2011 Apr 7;472(7341):120-4. doi: 10.1038/nature09819. Epub 2011 Mar 20.

17.

Quantitative models of the mechanisms that control genome-wide patterns of transcription factor binding during early Drosophila development.

Kaplan T, Li XY, Sabo PJ, Thomas S, Stamatoyannopoulos JA, Biggin MD, Eisen MB.

PLoS Genet. 2011 Feb 3;7(2):e1001290. doi: 10.1371/journal.pgen.1001290.

18.

Chromatin accessibility pre-determines glucocorticoid receptor binding patterns.

John S, Sabo PJ, Thurman RE, Sung MH, Biddie SC, Johnson TA, Hager GL, Stamatoyannopoulos JA.

Nat Genet. 2011 Mar;43(3):264-8. doi: 10.1038/ng.759. Epub 2011 Jan 23.

PMID:
21258342
19.

Epigenetic switch involved in activation of pioneer factor FOXA1-dependent enhancers.

Sérandour AA, Avner S, Percevault F, Demay F, Bizot M, Lucchetti-Miganeh C, Barloy-Hubler F, Brown M, Lupien M, Métivier R, Salbert G, Eeckhoute J.

Genome Res. 2011 Apr;21(4):555-65. doi: 10.1101/gr.111534.110. Epub 2011 Jan 13.

20.

Integrative model of genomic factors for determining binding site selection by estrogen receptor-α.

Joseph R, Orlov YL, Huss M, Sun W, Kong SL, Ukil L, Pan YF, Li G, Lim M, Thomsen JS, Ruan Y, Clarke ND, Prabhakar S, Cheung E, Liu ET.

Mol Syst Biol. 2010 Dec 21;6:456. doi: 10.1038/msb.2010.109.

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