Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 23

1.

MassWiz: a novel scoring algorithm with target-decoy based analysis pipeline for tandem mass spectrometry.

Yadav AK, Kumar D, Dash D.

J Proteome Res. 2011 May 6;10(5):2154-60. doi: 10.1021/pr200031z. Epub 2011 Apr 5.

PMID:
21417338
2.

Proteogenomic analysis of polymorphisms and gene annotation divergences in prokaryotes using a clustered mass spectrometry-friendly database.

de Souza GA, Arntzen MØ, Fortuin S, Schürch AC, Målen H, McEvoy CR, van Soolingen D, Thiede B, Warren RM, Wiker HG.

Mol Cell Proteomics. 2011 Jan;10(1):M110.002527. doi: 10.1074/mcp.M110.002527. Epub 2010 Oct 28.

3.

TubercuList--10 years after.

Lew JM, Kapopoulou A, Jones LM, Cole ST.

Tuberculosis (Edinb). 2011 Jan;91(1):1-7. doi: 10.1016/j.tube.2010.09.008. Epub 2010 Oct 25.

PMID:
20980199
4.

Proteogenomics to discover the full coding content of genomes: a computational perspective.

Castellana N, Bafna V.

J Proteomics. 2010 Oct 10;73(11):2124-35. doi: 10.1016/j.jprot.2010.06.007. Epub 2010 Jul 8. Review.

5.

Variation among genome sequences of H37Rv strains of Mycobacterium tuberculosis from multiple laboratories.

Ioerger TR, Feng Y, Ganesula K, Chen X, Dobos KM, Fortune S, Jacobs WR Jr, Mizrahi V, Parish T, Rubin E, Sassetti C, Sacchettini JC.

J Bacteriol. 2010 Jul;192(14):3645-53. doi: 10.1128/JB.00166-10. Epub 2010 May 14.

6.

Definition of novel cell envelope associated proteins in Triton X-114 extracts of Mycobacterium tuberculosis H37Rv.

Målen H, Pathak S, Søfteland T, de Souza GA, Wiker HG.

BMC Microbiol. 2010 Apr 29;10:132. doi: 10.1186/1471-2180-10-132.

7.

High accuracy mass spectrometry analysis as a tool to verify and improve gene annotation using Mycobacterium tuberculosis as an example.

de Souza GA, Målen H, Søfteland T, Saelensminde G, Prasad S, Jonassen I, Wiker HG.

BMC Genomics. 2008 Jul 2;9:316. doi: 10.1186/1471-2164-9-316.

8.

PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows.

Deutsch EW, Lam H, Aebersold R.

EMBO Rep. 2008 May;9(5):429-34. doi: 10.1038/embor.2008.56. Review.

9.

Quantitative proteomics using stable isotope labeling with amino acids in cell culture.

Harsha HC, Molina H, Pandey A.

Nat Protoc. 2008;3(3):505-16. doi: 10.1038/nprot.2008.2.

PMID:
18323819
10.

Comprehensive analysis of exported proteins from Mycobacterium tuberculosis H37Rv.

Målen H, Berven FS, Fladmark KE, Wiker HG.

Proteomics. 2007 May;7(10):1702-18.

PMID:
17443846
12.

Proteins unique to intraphagosomally grown Mycobacterium tuberculosis.

Mattow J, Siejak F, Hagens K, Becher D, Albrecht D, Krah A, Schmidt F, Jungblut PR, Kaufmann SH, Schaible UE.

Proteomics. 2006 Apr;6(8):2485-94.

PMID:
16548060
14.

Mycobacterium tuberculosis functional network analysis by global subcellular protein profiling.

Mawuenyega KG, Forst CV, Dobos KM, Belisle JT, Chen J, Bradbury EM, Bradbury AR, Chen X.

Mol Biol Cell. 2005 Jan;16(1):396-404. Epub 2004 Nov 3.

15.

Comprehensive proteomic profiling of the membrane constituents of a Mycobacterium tuberculosis strain.

Gu S, Chen J, Dobos KM, Bradbury EM, Belisle JT, Chen X.

Mol Cell Proteomics. 2003 Dec;2(12):1284-96. Epub 2003 Oct 6.

16.

Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv.

Camus JC, Pryor MJ, Médigue C, Cole ST.

Microbiology. 2002 Oct;148(Pt 10):2967-73.

PMID:
12368430
17.

Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains.

Fleischmann RD, Alland D, Eisen JA, Carpenter L, White O, Peterson J, DeBoy R, Dodson R, Gwinn M, Haft D, Hickey E, Kolonay JF, Nelson WC, Umayam LA, Ermolaeva M, Salzberg SL, Delcher A, Utterback T, Weidman J, Khouri H, Gill J, Mikula A, Bishai W, Jacobs Jr WR Jr, Venter JC, Fraser CM.

J Bacteriol. 2002 Oct;184(19):5479-90.

18.

Proteomics reveals open reading frames in Mycobacterium tuberculosis H37Rv not predicted by genomics.

Jungblut PR, Müller EC, Mattow J, Kaufmann SH.

Infect Immun. 2001 Sep;69(9):5905-7.

19.
20.

Use of mass spectrometry-derived data to annotate nucleotide and protein sequence databases.

Mann M, Pandey A.

Trends Biochem Sci. 2001 Jan;26(1):54-61. Review.

PMID:
11165518

Supplemental Content

Support Center