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Elucidation of the assembly events required for the recruitment of Utp20, Imp4 and Bms1 onto nascent pre-ribosomes.

Pérez-Fernández J, Martín-Marcos P, Dosil M.

Nucleic Acids Res. 2011 Oct;39(18):8105-21. doi: 10.1093/nar/gkr508. Epub 2011 Jun 30.


The small subunit processome in ribosome biogenesis—progress and prospects.

Phipps KR, Charette J, Baserga SJ.

Wiley Interdiscip Rev RNA. 2011 Jan-Feb;2(1):1-21. doi: 10.1002/wrna.57. Review.


RNA polymerase I-specific subunits promote polymerase clustering to enhance the rRNA gene transcription cycle.

Albert B, Léger-Silvestre I, Normand C, Ostermaier MK, Pérez-Fernández J, Panov KI, Zomerdijk JC, Schultz P, Gadal O.

J Cell Biol. 2011 Jan 24;192(2):277-93. doi: 10.1083/jcb.201006040.


The DEAD-box RNA helicase-like Utp25 is an SSU processome component.

Charette JM, Baserga SJ.

RNA. 2010 Nov;16(11):2156-69. doi: 10.1261/rna.2359810. Epub 2010 Sep 30.


Utp25p, a nucleolar Saccharomyces cerevisiae protein, interacts with U3 snoRNP subunits and affects processing of the 35S pre-rRNA.

Goldfeder MB, Oliveira CC.

FEBS J. 2010 Jul;277(13):2838-52. doi: 10.1111/j.1742-4658.2010.07701.x. Epub 2010 May 27.


In-depth exploration of cerebrospinal fluid by combining peptide ligand library treatment and label-free protein quantification.

Mouton-Barbosa E, Roux-Dalvai F, Bouyssié D, Berger F, Schmidt E, Righetti PG, Guerrier L, Boschetti E, Burlet-Schiltz O, Monsarrat B, Gonzalez de Peredo A.

Mol Cell Proteomics. 2010 May;9(5):1006-21. doi: 10.1074/mcp.M900513-MCP200. Epub 2010 Jan 21.


Evolutionarily conserved function of RRP36 in early cleavages of the pre-rRNA and production of the 40S ribosomal subunit.

Gérus M, Bonnart C, Caizergues-Ferrer M, Henry Y, Henras AK.

Mol Cell Biol. 2010 Mar;30(5):1130-44. doi: 10.1128/MCB.00999-09. Epub 2009 Dec 28.


The nuclear poly(A) polymerase and Exosome cofactor Trf5 is recruited cotranscriptionally to nucleolar surveillance.

Wery M, Ruidant S, Schillewaert S, Leporé N, Lafontaine DL.

RNA. 2009 Mar;15(3):406-19. doi: 10.1261/rna.1402709. Epub 2009 Jan 13.


High-resolution statistical mapping reveals gene territories in live yeast.

Berger AB, Cabal GG, Fabre E, Duong T, Buc H, Nehrbass U, Olivo-Marin JC, Gadal O, Zimmer C.

Nat Methods. 2008 Dec;5(12):1031-7. doi: 10.1038/nmeth.1266. Epub 2008 Nov 2.


Mrd1p binds to pre-rRNA early during transcription independent of U3 snoRNA and is required for compaction of the pre-rRNA into small subunit processomes.

Segerstolpe A, Lundkvist P, Osheim YN, Beyer AL, Wieslander L.

Nucleic Acids Res. 2008 Aug;36(13):4364-80. doi: 10.1093/nar/gkn384. Epub 2008 Jun 27.


The post-transcriptional steps of eukaryotic ribosome biogenesis.

Henras AK, Soudet J, Gérus M, Lebaron S, Caizergues-Ferrer M, Mougin A, Henry Y.

Cell Mol Life Sci. 2008 Aug;65(15):2334-59. doi: 10.1007/s00018-008-8027-0. Review.


Nop9 is an RNA binding protein present in pre-40S ribosomes and required for 18S rRNA synthesis in yeast.

Thomson E, Rappsilber J, Tollervey D.

RNA. 2007 Dec;13(12):2165-74. Epub 2007 Oct 23.


Assembly factors Rpf2 and Rrs1 recruit 5S rRNA and ribosomal proteins rpL5 and rpL11 into nascent ribosomes.

Zhang J, Harnpicharnchai P, Jakovljevic J, Tang L, Guo Y, Oeffinger M, Rout MP, Hiley SL, Hughes T, Woolford JL Jr.

Genes Dev. 2007 Oct 15;21(20):2580-92.


Mascot file parsing and quantification (MFPaQ), a new software to parse, validate, and quantify proteomics data generated by ICAT and SILAC mass spectrometric analyses: application to the proteomics study of membrane proteins from primary human endothelial cells.

Bouyssié D, Gonzalez de Peredo A, Mouton E, Albigot R, Roussel L, Ortega N, Cayrol C, Burlet-Schiltz O, Girard JP, Monsarrat B.

Mol Cell Proteomics. 2007 Sep;6(9):1621-37. Epub 2007 May 28.


The 90S preribosome is a multimodular structure that is assembled through a hierarchical mechanism.

Pérez-Fernández J, Román A, De Las Rivas J, Bustelo XR, Dosil M.

Mol Cell Biol. 2007 Aug;27(15):5414-29. Epub 2007 May 21.


Global landscape of protein complexes in the yeast Saccharomyces cerevisiae.

Krogan NJ, Cagney G, Yu H, Zhong G, Guo X, Ignatchenko A, Li J, Pu S, Datta N, Tikuisis AP, Punna T, Peregrín-Alvarez JM, Shales M, Zhang X, Davey M, Robinson MD, Paccanaro A, Bray JE, Sheung A, Beattie B, Richards DP, Canadien V, Lalev A, Mena F, Wong P, Starostine A, Canete MM, Vlasblom J, Wu S, Orsi C, Collins SR, Chandran S, Haw R, Rilstone JJ, Gandi K, Thompson NJ, Musso G, St Onge P, Ghanny S, Lam MH, Butland G, Altaf-Ul AM, Kanaya S, Shilatifard A, O'Shea E, Weissman JS, Ingles CJ, Hughes TR, Parkinson J, Gerstein M, Wodak SJ, Emili A, Greenblatt JF.

Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.


Comprehensive mutational analysis of yeast DEXD/H box RNA helicases required for small ribosomal subunit synthesis.

Granneman S, Bernstein KA, Bleichert F, Baserga SJ.

Mol Cell Biol. 2006 Feb;26(4):1183-94.


The splicing ATPase prp43p is a component of multiple preribosomal particles.

Lebaron S, Froment C, Fromont-Racine M, Rain JC, Monsarrat B, Caizergues-Ferrer M, Henry Y.

Mol Cell Biol. 2005 Nov;25(21):9269-82.


Pre-18S ribosomal RNA is structurally compacted into the SSU processome prior to being cleaved from nascent transcripts in Saccharomyces cerevisiae.

Osheim YN, French SL, Keck KM, Champion EA, Spasov K, Dragon F, Baserga SJ, Beyer AL.

Mol Cell. 2004 Dec 22;16(6):943-54.

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