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Genome-wide measurement of RNA secondary structure in yeast.

Kertesz M, Wan Y, Mazor E, Rinn JL, Nutter RC, Chang HY, Segal E.

Nature. 2010 Sep 2;467(7311):103-7. doi: 10.1038/nature09322.


Sequence signatures and mRNA concentration can explain two-thirds of protein abundance variation in a human cell line.

Vogel C, Abreu Rde S, Ko D, Le SY, Shapiro BA, Burns SC, Sandhu D, Boutz DR, Marcotte EM, Penalva LO.

Mol Syst Biol. 2010 Aug 24;6:400. doi: 10.1038/msb.2010.59.


Requirement of glutathione for Sod1 activation during lifespan extension.

Mannarino SC, Vilela LF, Brasil AA, Aranha JN, Moradas-Ferreira P, Pereira MD, Costa V, Eleutherio EC.

Yeast. 2011 Jan;28(1):19-25. doi: 10.1002/yea.1817. Epub 2010 Aug 24.


A new dominant peroxiredoxin allele identified by whole-genome re-sequencing of random mutagenized yeast causes oxidant-resistance and premature aging.

Timmermann B, Jarolim S, Russmayer H, Kerick M, Michel S, Krüger A, Bluemlein K, Laun P, Grillari J, Lehrach H, Breitenbach M, Ralser M.

Aging (Albany NY). 2010 Aug;2(8):475-86.


Characterization of the Brain 26S Proteasome and its Interacting Proteins.

Tai HC, Besche H, Goldberg AL, Schuman EM.

Front Mol Neurosci. 2010 May 21;3. pii: 12. doi: 10.3389/fnmol.2010.00012. eCollection 2010.


RNA polymerase mapping during stress responses reveals widespread nonproductive transcription in yeast.

Kim TS, Liu CL, Yassour M, Holik J, Friedman N, Buratowski S, Rando OJ.

Genome Biol. 2010;11(7):R75. doi: 10.1186/gb-2010-11-7-r75. Epub 2010 Jul 16.


Yeast as a model to study mitochondrial mechanisms in ageing.

Barros MH, da Cunha FM, Oliveira GA, Tahara EB, Kowaltowski AJ.

Mech Ageing Dev. 2010 Jul-Aug;131(7-8):494-502. doi: 10.1016/j.mad.2010.04.008. Epub 2010 May 5. Review.


Localization to, and effects of Pbp1, Pbp4, Lsm12, Dhh1, and Pab1 on stress granules in Saccharomyces cerevisiae.

Swisher KD, Parker R.

PLoS One. 2010 Apr 2;5(4):e10006. doi: 10.1371/journal.pone.0010006.


Proteomic analysis of the oxidative stress response in Kluyveromyces lactis and effect of glutathione reductase depletion.

García-Leiro A, Cerdán ME, González-Siso MI.

J Proteome Res. 2010 May 7;9(5):2358-76. doi: 10.1021/pr901086w.


Ribosome-associated peroxiredoxins suppress oxidative stress-induced de novo formation of the [PSI+] prion in yeast.

Sideri TC, Stojanovski K, Tuite MF, Grant CM.

Proc Natl Acad Sci U S A. 2010 Apr 6;107(14):6394-9. doi: 10.1073/pnas.1000347107. Epub 2010 Mar 22.


There is a steady-state transcriptome in exponentially growing yeast cells.

Pelechano V, Pérez-Ortín JE.

Yeast. 2010 Jul;27(7):413-22. doi: 10.1002/yea.1768.


Structure and function of yeast glutaredoxin 2 depend on postranslational processing and are related to subcellular distribution.

Porras P, McDonagh B, Pedrajas JR, Bárcena JA, Padilla CA.

Biochim Biophys Acta. 2010 Apr;1804(4):839-45. doi: 10.1016/j.bbapap.2009.12.012. Epub 2009 Dec 28.


Yeast unfolds the road map toward alpha-synuclein-induced cell death.

Franssens V, Boelen E, Anandhakumar J, Vanhelmont T, Büttner S, Winderickx J.

Cell Death Differ. 2010 May;17(5):746-53. doi: 10.1038/cdd.2009.203. Epub 2009 Dec 18. Review.


Delayed correlation of mRNA and protein expression in rapamycin-treated cells and a role for Ggc1 in cellular sensitivity to rapamycin.

Fournier ML, Paulson A, Pavelka N, Mosley AL, Gaudenz K, Bradford WD, Glynn E, Li H, Sardiu ME, Fleharty B, Seidel C, Florens L, Washburn MP.

Mol Cell Proteomics. 2010 Feb;9(2):271-84. doi: 10.1074/mcp.M900415-MCP200. Epub 2009 Nov 10.


Loss of yeast peroxiredoxin Tsa1p induces genome instability through activation of the DNA damage checkpoint and elevation of dNTP levels.

Tang HM, Siu KL, Wong CM, Jin DY.

PLoS Genet. 2009 Oct;5(10):e1000697. doi: 10.1371/journal.pgen.1000697. Epub 2009 Oct 23.


Activation of translation via reduction by thioredoxin-thioredoxin reductase in Saccharomyces cerevisiae.

Jun KO, Song CH, Kim YB, An J, Oh JH, Choi SK.

FEBS Lett. 2009 Sep 3;583(17):2804-10. doi: 10.1016/j.febslet.2009.07.030. Epub 2009 Jul 19.


Peroxiredoxin Tsa1 is the key peroxidase suppressing genome instability and protecting against cell death in Saccharomyces cerevisiae.

Iraqui I, Kienda G, Soeur J, Faye G, Baldacci G, Kolodner RD, Huang ME.

PLoS Genet. 2009 Jun;5(6):e1000524. doi: 10.1371/journal.pgen.1000524. Epub 2009 Jun 19.


An atlas of chaperone-protein interactions in Saccharomyces cerevisiae: implications to protein folding pathways in the cell.

Gong Y, Kakihara Y, Krogan N, Greenblatt J, Emili A, Zhang Z, Houry WA.

Mol Syst Biol. 2009;5:275. doi: 10.1038/msb.2009.26. Epub 2009 Jun 16.


The histone deacetylase Rpd3p is required for transient changes in genomic expression in response to stress.

Alejandro-Osorio AL, Huebert DJ, Porcaro DT, Sonntag ME, Nillasithanukroh S, Will JL, Gasch AP.

Genome Biol. 2009;10(5):R57. doi: 10.1186/gb-2009-10-5-r57. Epub 2009 May 26.


Stress-dependent coordination of transcriptome and translatome in yeast.

Halbeisen RE, Gerber AP.

PLoS Biol. 2009 May;7(5):e1000105. doi: 10.1371/journal.pbio.1000105. Epub 2009 May 5.

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