Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 27

1.

Overview of the CCP4 suite and current developments.

Winn MD, Ballard CC, Cowtan KD, Dodson EJ, Emsley P, Evans PR, Keegan RM, Krissinel EB, Leslie AG, McCoy A, McNicholas SJ, Murshudov GN, Pannu NS, Potterton EA, Powell HR, Read RJ, Vagin A, Wilson KS.

Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):235-42. doi: 10.1107/S0907444910045749. Epub 2011 Mar 18.

2.

Metabolic engineering of seeds can achieve levels of omega-7 fatty acids comparable with the highest levels found in natural plant sources.

Nguyen HT, Mishra G, Whittle E, Pidkowich MS, Bevan SA, Merlo AO, Walsh TA, Shanklin J.

Plant Physiol. 2010 Dec;154(4):1897-904. doi: 10.1104/pp.110.165340. Epub 2010 Oct 13. Erratum in: Plant Physiol. 2011 Mar;155(3):1473. Pidkowich, Mark S [added].

3.

Dali server: conservation mapping in 3D.

Holm L, Rosenström P.

Nucleic Acids Res. 2010 Jul;38(Web Server issue):W545-9. doi: 10.1093/nar/gkq366. Epub 2010 May 10.

4.

The HADDOCK web server for data-driven biomolecular docking.

de Vries SJ, van Dijk M, Bonvin AM.

Nat Protoc. 2010 May;5(5):883-97. doi: 10.1038/nprot.2010.32. Epub 2010 Apr 15.

PMID:
20431534
5.

Features and development of Coot.

Emsley P, Lohkamp B, Scott WG, Cowtan K.

Acta Crystallogr D Biol Crystallogr. 2010 Apr;66(Pt 4):486-501. doi: 10.1107/S0907444910007493. Epub 2010 Mar 24.

6.

Revealing the catalytic potential of an acyl-ACP desaturase: tandem selective oxidation of saturated fatty acids.

Whittle EJ, Tremblay AE, Buist PH, Shanklin J.

Proc Natl Acad Sci U S A. 2008 Sep 23;105(38):14738-43. doi: 10.1073/pnas.0805645105. Epub 2008 Sep 16.

7.

Inference of macromolecular assemblies from crystalline state.

Krissinel E, Henrick K.

J Mol Biol. 2007 Sep 21;372(3):774-97. Epub 2007 May 13.

PMID:
17681537
8.

The crystal structure of the ivy Delta4-16:0-ACP desaturase reveals structural details of the oxidized active site and potential determinants of regioselectivity.

Guy JE, Whittle E, Kumaran D, Lindqvist Y, Shanklin J.

J Biol Chem. 2007 Jul 6;282(27):19863-71. Epub 2007 Apr 26.

9.

MolProbity: all-atom contacts and structure validation for proteins and nucleic acids.

Davis IW, Leaver-Fay A, Chen VB, Block JN, Kapral GJ, Wang X, Murray LW, Arendall WB 3rd, Snoeyink J, Richardson JS, Richardson DC.

Nucleic Acids Res. 2007 Jul;35(Web Server issue):W375-83. Epub 2007 Apr 22.

10.

Stereochemistry of Delta4 dehydrogenation catalyzed by an ivy (Hedera helix) Delta9 desaturase homolog.

Tremblay AE, Whittle E, Buist PH, Shanklin J.

Org Biomol Chem. 2007 Apr 21;5(8):1270-5. Epub 2007 Mar 19.

PMID:
17406726
11.

A multifunctional acyl-acyl carrier protein desaturase from Hedera helix L. (English ivy) can synthesize 16- and 18-carbon monoene and diene products.

Whittle E, Cahoon EB, Subrahmanyam S, Shanklin J.

J Biol Chem. 2005 Aug 5;280(31):28169-76. Epub 2005 Jun 6.

12.

Refinement of macromolecular structures by the maximum-likelihood method.

Murshudov GN, Vagin AA, Dodson EJ.

Acta Crystallogr D Biol Crystallogr. 1997 May 1;53(Pt 3):240-55.

PMID:
15299926
13.

Switching desaturase enzyme specificity by alternate subcellular targeting.

Heilmann I, Pidkowich MS, Girke T, Shanklin J.

Proc Natl Acad Sci U S A. 2004 Jul 13;101(28):10266-71. Epub 2004 Jul 6.

14.

DESATURATION AND RELATED MODIFICATIONS OF FATTY ACIDS1.

Shanklin J, Cahoon EB.

Annu Rev Plant Physiol Plant Mol Biol. 1998 Jun;49:611-641.

PMID:
15012248
16.
17.

Exploring the hydroxylation-dehydrogenation connection: novel catalytic activity of castor stearoyl-ACP Delta(9) desaturase.

Behrouzian B, Savile CK, Dawson B, Buist PH, Shanklin J.

J Am Chem Soc. 2002 Apr 3;124(13):3277-83.

PMID:
11916411
18.
19.

Exploring the possibilities presented by protein engineering.

Shanklin J.

Curr Opin Plant Biol. 2000 Jun;3(3):243-8. Review.

PMID:
10837269
20.

Overexpression and purification of the Escherichia coli inner membrane enzyme acyl-acyl carrier protein synthase in an active form.

Shanklin J.

Protein Expr Purif. 2000 Apr;18(3):355-60. Erratum in: Protein Expr Purif 2000 Jul;19(2):319. Protein Expr Purif. 2007 Apr;52(2):485.

PMID:
10733890

Supplemental Content

Support Center