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Items: 1 to 20 of 30

1.

Structural basis for substrate selectivity in human maltase-glucoamylase and sucrase-isomaltase N-terminal domains.

Sim L, Willemsma C, Mohan S, Naim HY, Pinto BM, Rose DR.

J Biol Chem. 2010 Jun 4;285(23):17763-70. doi: 10.1074/jbc.M109.078980. Epub 2010 Mar 31.

2.

SLiM on Diet: finding short linear motifs on domain interaction interfaces in Protein Data Bank.

Hugo W, Song F, Aung Z, Ng SK, Sung WK.

Bioinformatics. 2010 Apr 15;26(8):1036-42. doi: 10.1093/bioinformatics/btq065. Epub 2010 Feb 18.

PMID:
20167627
3.

ELM: the status of the 2010 eukaryotic linear motif resource.

Gould CM, Diella F, Via A, Puntervoll P, Gemünd C, Chabanis-Davidson S, Michael S, Sayadi A, Bryne JC, Chica C, Seiler M, Davey NE, Haslam N, Weatheritt RJ, Budd A, Hughes T, Pas J, Rychlewski L, Travé G, Aasland R, Helmer-Citterich M, Linding R, Gibson TJ.

Nucleic Acids Res. 2010 Jan;38(Database issue):D167-80. doi: 10.1093/nar/gkp1016. Epub 2009 Nov 17.

4.

Plk1 self-organization and priming phosphorylation of HsCYK-4 at the spindle midzone regulate the onset of division in human cells.

Burkard ME, Maciejowski J, Rodriguez-Bravo V, Repka M, Lowery DM, Clauser KR, Zhang C, Shokat KM, Carr SA, Yaffe MB, Jallepalli PV.

PLoS Biol. 2009 May 5;7(5):e1000111. doi: 10.1371/journal.pbio.1000111. Epub 2009 May 26.

5.

Structural and functional interaction between the human DNA repair proteins DNA ligase IV and XRCC4.

Wu PY, Frit P, Meesala S, Dauvillier S, Modesti M, Andres SN, Huang Y, Sekiguchi J, Calsou P, Salles B, Junop MS.

Mol Cell Biol. 2009 Jun;29(11):3163-72. doi: 10.1128/MCB.01895-08. Epub 2009 Mar 30.

6.

Discovering sequence motifs with arbitrary insertions and deletions.

Frith MC, Saunders NF, Kobe B, Bailey TL.

PLoS Comput Biol. 2008 May 9;4(4):e1000071. doi: 10.1371/journal.pcbi.1000071.

8.

The crystal structure of Ebp1 reveals a methionine aminopeptidase fold as binding platform for multiple interactions.

Kowalinski E, Bange G, Bradatsch B, Hurt E, Wild K, Sinning I.

FEBS Lett. 2007 Sep 18;581(23):4450-4. Epub 2007 Aug 27.

9.

Local structural disorder imparts plasticity on linear motifs.

Fuxreiter M, Tompa P, Simon I.

Bioinformatics. 2007 Apr 15;23(8):950-6. Epub 2007 Mar 25.

PMID:
17387114
10.

NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins.

Pruitt KD, Tatusova T, Maglott DR.

Nucleic Acids Res. 2007 Jan;35(Database issue):D61-5. Epub 2006 Nov 27.

11.

A correlated motif approach for finding short linear motifs from protein interaction networks.

Tan SH, Hugo W, Sung WK, Ng SK.

BMC Bioinformatics. 2006 Nov 16;7:502.

12.

Systematic discovery of new recognition peptides mediating protein interaction networks.

Neduva V, Linding R, Su-Angrand I, Stark A, de Masi F, Gibson TJ, Lewis J, Serrano L, Russell RB.

PLoS Biol. 2005 Dec;3(12):e405. Epub 2005 Nov 15.

13.

MINER: software for phylogenetic motif identification.

La D, Livesay DR.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W267-70.

14.

Linear motifs: evolutionary interaction switches.

Neduva V, Russell RB.

FEBS Lett. 2005 Jun 13;579(15):3342-5. Epub 2005 Apr 18. Review.

16.

Structures of human MAP kinase kinase 1 (MEK1) and MEK2 describe novel noncompetitive kinase inhibition.

Ohren JF, Chen H, Pavlovsky A, Whitehead C, Zhang E, Kuffa P, Yan C, McConnell P, Spessard C, Banotai C, Mueller WT, Delaney A, Omer C, Sebolt-Leopold J, Dudley DT, Leung IK, Flamme C, Warmus J, Kaufman M, Barrett S, Tecle H, Hasemann CA.

Nat Struct Mol Biol. 2004 Dec;11(12):1192-7. Epub 2004 Nov 14. Erratum in: Nat Struct Mol Biol. 2005 Mar;12(3):278.

PMID:
15543157
17.

EBP1 is a nucleolar growth-regulating protein that is part of pre-ribosomal ribonucleoprotein complexes.

Squatrito M, Mancino M, Donzelli M, Areces LB, Draetta GF.

Oncogene. 2004 May 27;23(25):4454-65.

PMID:
15064750
18.

Increasing specificity in high-throughput yeast two-hybrid experiments.

Vidalain PO, Boxem M, Ge H, Li S, Vidal M.

Methods. 2004 Apr;32(4):363-70.

PMID:
15003598
19.

Optimization of specificity in a cellular protein interaction network by negative selection.

Zarrinpar A, Park SH, Lim WA.

Nature. 2003 Dec 11;426(6967):676-80.

PMID:
14668868
20.

Tetramerization and DNA ligase IV interaction of the DNA double-strand break repair protein XRCC4 are mutually exclusive.

Modesti M, Junop MS, Ghirlando R, van de Rakt M, Gellert M, Yang W, Kanaar R.

J Mol Biol. 2003 Nov 21;334(2):215-28.

PMID:
14607114

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