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Proteasome inhibitors induce nucleolar aggregation of proteasome target proteins and polyadenylated RNA by altering ubiquitin availability.

Latonen L, Moore HM, Bai B, Jäämaa S, Laiho M.

Oncogene. 2011 Feb 17;30(7):790-805. doi: 10.1038/onc.2010.469. Epub 2010 Oct 18.


Large-scale data integration framework provides a comprehensive view on glioblastoma multiforme.

Ovaska K, Laakso M, Haapa-Paananen S, Louhimo R, Chen P, Aittomäki V, Valo E, Núñez-Fontarnau J, Rantanen V, Karinen S, Nousiainen K, Lahesmaa-Korpinen AM, Miettinen M, Saarinen L, Kohonen P, Wu J, Westermarck J, Hautaniemi S.

Genome Med. 2010 Sep 7;2(9):65. doi: 10.1186/gm186.


Involvement of Matrin 3 and SFPQ/NONO in the DNA damage response.

Salton M, Lerenthal Y, Wang SY, Chen DJ, Shiloh Y.

Cell Cycle. 2010 Apr 15;9(8):1568-76. Epub 2010 Apr 15.


The RNA polymerase I transcription machinery: an emerging target for the treatment of cancer.

Drygin D, Rice WG, Grummt I.

Annu Rev Pharmacol Toxicol. 2010;50:131-56. doi: 10.1146/annurev.pharmtox.010909.105844. Review.


A quantitative proteomics analysis of subcellular proteome localization and changes induced by DNA damage.

Boisvert FM, Lam YW, Lamont D, Lamond AI.

Mol Cell Proteomics. 2010 Mar;9(3):457-70. doi: 10.1074/mcp.M900429-MCP200. Epub 2009 Dec 21.


The DNA-damage response in human biology and disease.

Jackson SP, Bartek J.

Nature. 2009 Oct 22;461(7267):1071-8. doi: 10.1038/nature08467. Review.


Involvement of p54(nrb), a PSF partner protein, in DNA double-strand break repair and radioresistance.

Li S, Kuhne WW, Kulharya A, Hudson FZ, Ha K, Cao Z, Dynan WS.

Nucleic Acids Res. 2009 Nov;37(20):6746-53. doi: 10.1093/nar/gkp741. Epub 2009 Sep 16.


Paraspeckles: nuclear bodies built on long noncoding RNA.

Bond CS, Fox AH.

J Cell Biol. 2009 Sep 7;186(5):637-44. doi: 10.1083/jcb.200906113. Epub 2009 Aug 31. Review.


Ribosomal protein S3: A multi-functional protein that interacts with both p53 and MDM2 through its KH domain.

Yadavilli S, Mayo LD, Higgins M, Lain S, Hegde V, Deutsch WA.

DNA Repair (Amst). 2009 Oct 2;8(10):1215-24. doi: 10.1016/j.dnarep.2009.07.003. Epub 2009 Aug 4.


Translational reprogramming following UVB irradiation is mediated by DNA-PKcs and allows selective recruitment to the polysomes of mRNAs encoding DNA repair enzymes.

Powley IR, Kondrashov A, Young LA, Dobbyn HC, Hill K, Cannell IG, Stoneley M, Kong YW, Cotes JA, Smith GC, Wek R, Hayes C, Gant TW, Spriggs KA, Bushell M, Willis AE.

Genes Dev. 2009 May 15;23(10):1207-20. doi: 10.1101/gad.516509.


In search of nonribosomal nucleolar protein function and regulation.

Pederson T, Tsai RY.

J Cell Biol. 2009 Mar 23;184(6):771-6. doi: 10.1083/jcb.200812014. Epub 2009 Mar 16. Review.


APE1/Ref-1 interacts with NPM1 within nucleoli and plays a role in the rRNA quality control process.

Vascotto C, Fantini D, Romanello M, Cesaratto L, Deganuto M, Leonardi A, Radicella JP, Kelley MR, D'Ambrosio C, Scaloni A, Quadrifoglio F, Tell G.

Mol Cell Biol. 2009 Apr;29(7):1834-54. doi: 10.1128/MCB.01337-08. Epub 2009 Feb 2.


MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification.

Cox J, Mann M.

Nat Biotechnol. 2008 Dec;26(12):1367-72. doi: 10.1038/nbt.1511. Epub 2008 Nov 30.


NOPdb: Nucleolar Proteome Database--2008 update.

Ahmad Y, Boisvert FM, Gregor P, Cobley A, Lamond AI.

Nucleic Acids Res. 2009 Jan;37(Database issue):D181-4. doi: 10.1093/nar/gkn804. Epub 2008 Nov 4.


Nucleophosmin serves as a rate-limiting nuclear export chaperone for the Mammalian ribosome.

Maggi LB Jr, Kuchenruether M, Dadey DY, Schwope RM, Grisendi S, Townsend RR, Pandolfi PP, Weber JD.

Mol Cell Biol. 2008 Dec;28(23):7050-65. doi: 10.1128/MCB.01548-07. Epub 2008 Sep 22.


The epigenetics of rRNA genes: from molecular to chromosome biology.

McStay B, Grummt I.

Annu Rev Cell Dev Biol. 2008;24:131-57. doi: 10.1146/annurev.cellbio.24.110707.175259. Review.


Supreme EnLIGHTenment: damage recognition and signaling in the mammalian UV response.

Herrlich P, Karin M, Weiss C.

Mol Cell. 2008 Feb 15;29(3):279-90. doi: 10.1016/j.molcel.2008.01.001. Review.


Nucleolus: the fascinating nuclear body.

Sirri V, Urcuqui-Inchima S, Roussel P, Hernandez-Verdun D.

Histochem Cell Biol. 2008 Jan;129(1):13-31. Epub 2007 Nov 29. Review.


The long unwinding road of RNA helicases.

Bleichert F, Baserga SJ.

Mol Cell. 2007 Aug 3;27(3):339-52. Review.


The ATM repair pathway inhibits RNA polymerase I transcription in response to chromosome breaks.

Kruhlak M, Crouch EE, Orlov M, Montaño C, Gorski SA, Nussenzweig A, Misteli T, Phair RD, Casellas R.

Nature. 2007 Jun 7;447(7145):730-4.


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