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Items: 1 to 20 of 63

2.

Proton-coupled electron transfer in cytochrome oxidase.

Kaila VR, Verkhovsky MI, Wikström M.

Chem Rev. 2010 Dec 8;110(12):7062-81. doi: 10.1021/cr1002003. Review. No abstract available.

PMID:
21053971
3.

Theory of coupled electron and proton transfer reactions.

Hammes-Schiffer S, Stuchebrukhov AA.

Chem Rev. 2010 Dec 8;110(12):6939-60. doi: 10.1021/cr1001436. Review. No abstract available.

4.

Mechanism of fast proton transport along one-dimensional water chains confined in carbon nanotubes.

Cao Z, Peng Y, Yan T, Li S, Li A, Voth GA.

J Am Chem Soc. 2010 Aug 25;132(33):11395-7. doi: 10.1021/ja1046704.

PMID:
20669967
5.

Reductive half-reaction of aldehyde oxidoreductase toward acetaldehyde: Ab initio and free energy quantum mechanical/molecular mechanical calculations.

Dieterich JM, Werner HJ, Mata RA, Metz S, Thiel W.

J Chem Phys. 2010 Jan 21;132(3):035101. doi: 10.1063/1.3280164.

PMID:
20095751
6.

Artificial reaction coordinate "tunneling" in free-energy calculations: the catalytic reaction of RNase H.

Rosta E, Woodcock HL, Brooks BR, Hummer G.

J Comput Chem. 2009 Aug;30(11):1634-41. doi: 10.1002/jcc.21312.

7.

Distance-dependent proton transfer along water wires connecting acid-base pairs.

Cox MJ, Timmer RL, Bakker HJ, Park S, Agmon N.

J Phys Chem A. 2009 Jun 18;113(24):6599-606. doi: 10.1021/jp9004778.

PMID:
19449829
8.

Mechanisms of proton transfer in proteins: localized charge transfer versus delocalized soliton transfer.

Stuchebrukhov AA.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Mar;79(3 Pt 1):031927.

9.

Dielectric relaxation of cytochrome c oxidase: Comparison of the microscopic and continuum models.

Leontyev IV, Stuchebrukhov AA.

J Chem Phys. 2009 Feb 28;130(8):085103. doi: 10.1063/1.3060196.

10.

Functional hydration and conformational gating of proton uptake in cytochrome c oxidase.

Henry RM, Yu CH, Rodinger T, Pomès R.

J Mol Biol. 2009 Apr 17;387(5):1165-85. doi: 10.1016/j.jmb.2009.02.042.

PMID:
19248790
11.

Macroscopically ordered water in nanopores.

Köfinger J, Hummer G, Dellago C.

Proc Natl Acad Sci U S A. 2008 Sep 9;105(36):13218-22. doi: 10.1073/pnas.0801448105.

12.

Special pair dance and partner selection: elementary steps in proton transport in liquid water.

Markovitch O, Chen H, Izvekov S, Paesani F, Voth GA, Agmon N.

J Phys Chem B. 2008 Aug 7;112(31):9456-66. doi: 10.1021/jp804018y.

PMID:
18630857
13.

Electrostatic basis for the unidirectionality of the primary proton transfer in cytochrome c oxidase.

Pisliakov AV, Sharma PK, Chu ZT, Haranczyk M, Warshel A.

Proc Natl Acad Sci U S A. 2008 Jun 3;105(22):7726-31. doi: 10.1073/pnas.0800580105.

14.

Glutamic acid 242 is a valve in the proton pump of cytochrome c oxidase.

Kaila VR, Verkhovsky MI, Hummer G, Wikström M.

Proc Natl Acad Sci U S A. 2008 Apr 29;105(17):6255-9. doi: 10.1073/pnas.0800770105.

15.
16.

Dynamic Stokes shift in green fluorescent protein variants.

Abbyad P, Childs W, Shi X, Boxer SG.

Proc Natl Acad Sci U S A. 2007 Dec 18;104(51):20189-94.

17.

Proton-coupled electron transfer.

Huynh MH, Meyer TJ.

Chem Rev. 2007 Nov;107(11):5004-64. Review. No abstract available.

18.

Time-resolved ATR-FTIR spectroscopy of the oxygen reaction in the D124N mutant of cytochrome c oxidase from Paracoccus denitrificans.

Gorbikova EA, Belevich NP, Wikström M, Verkhovsky MI.

Biochemistry. 2007 Nov 13;46(45):13141-8.

PMID:
17949011
19.

On the role of water in intermolecular proton-transfer reactions.

Siwick BJ, Bakker HJ.

J Am Chem Soc. 2007 Nov 7;129(44):13412-20.

PMID:
17935322
20.

Minimum energy pathways for proton transfer between adjacent sites exposed to water.

Friedman R, Fischer S, Nachliel E, Scheiner S, Gutman M.

J Phys Chem B. 2007 May 31;111(21):6059-70.

PMID:
17488114
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