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Items: 1 to 20 of 35

1.

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database.

Eng JK, McCormack AL, Yates JR.

J Am Soc Mass Spectrom. 1994 Nov;5(11):976-89. doi: 10.1016/1044-0305(94)80016-2.

PMID:
24226387
2.

Evaluation of different two-dimensional chromatographic techniques for proteomic analysis of mouse cardiac tissue.

Callipo L, Capriotti AL, Cavaliere C, Gubbiotti R, Samperi R, Laganà A.

Biomed Chromatogr. 2011 May;25(5):594-9. doi: 10.1002/bmc.1487.

PMID:
20652868
3.

Novel application of electrostatic repulsion-hydrophilic interaction chromatography (ERLIC) in shotgun proteomics: comprehensive profiling of rat kidney proteome.

Hao P, Guo T, Li X, Adav SS, Yang J, Wei M, Sze SK.

J Proteome Res. 2010 Jul 2;9(7):3520-6. doi: 10.1021/pr100037h.

PMID:
20450224
4.

Characterization of the adult zebrafish cardiac proteome using online pH gradient strong cation exchange-RP 2D LC coupled with ESI MS/MS.

Zhang J, Lanham KA, Peterson RE, Heideman W, Li L.

J Sep Sci. 2010 Jun;33(10):1462-71. doi: 10.1002/jssc.200900780.

PMID:
20235133
5.

Quantitative analysis of proteome coverage and recovery rates for upstream fractionation methods in proteomics.

Fang Y, Robinson DP, Foster LJ.

J Proteome Res. 2010 Apr 5;9(4):1902-12. doi: 10.1021/pr901063t.

PMID:
20078137
6.

Comparison of extensive protein fractionation and repetitive LC-MS/MS analyses on depth of analysis for complex proteomes.

Wang H, Chang-Wong T, Tang HY, Speicher DW.

J Proteome Res. 2010 Feb 5;9(2):1032-40. doi: 10.1021/pr900927y.

7.

Reversed-phase-reversed-phase liquid chromatography approach with high orthogonality for multidimensional separation of phosphopeptides.

Song C, Ye M, Han G, Jiang X, Wang F, Yu Z, Chen R, Zou H.

Anal Chem. 2010 Jan 1;82(1):53-6. doi: 10.1021/ac9023044.

PMID:
19950968
8.

Software tool for researching annotations of proteins: open-source protein annotation software with data visualization.

Bhatia VN, Perlman DH, Costello CE, McComb ME.

Anal Chem. 2009 Dec 1;81(23):9819-23. doi: 10.1021/ac901335x.

9.

Comparative analysis of OFFGel, strong cation exchange with pH gradient, and RP at high pH for first-dimensional separation of peptides from a membrane-enriched protein fraction.

Manadas B, English JA, Wynne KJ, Cotter DR, Dunn MJ.

Proteomics. 2009 Nov;9(22):5194-8. doi: 10.1002/pmic.200900349.

PMID:
19771557
10.

Comparison of 1-D and 2-D LC MS/MS methods for proteomic analysis of human serum.

Gilar M, Olivova P, Chakraborty AB, Jaworski A, Geromanos SJ, Gebler JC.

Electrophoresis. 2009 Apr;30(7):1157-67. doi: 10.1002/elps.200800630.

PMID:
19283699
11.

Evaluation of strong cation exchange versus isoelectric focusing of peptides for multidimensional liquid chromatography-tandem mass spectrometry.

Slebos RJ, Brock JW, Winters NF, Stuart SR, Martinez MA, Li M, Chambers MC, Zimmerman LJ, Ham AJ, Tabb DL, Liebler DC.

J Proteome Res. 2008 Dec;7(12):5286-94. doi: 10.1021/pr8004666.

12.

Practical implementation of 2D HPLC scheme with accurate peptide retention prediction in both dimensions for high-throughput bottom-up proteomics.

Dwivedi RC, Spicer V, Harder M, Antonovici M, Ens W, Standing KG, Wilkins JA, Krokhin OV.

Anal Chem. 2008 Sep 15;80(18):7036-42. doi: 10.1021/ac800984n.

PMID:
18686972
13.

Comparison of two-dimensional fractionation techniques for shotgun proteomics.

Dowell JA, Frost DC, Zhang J, Li L.

Anal Chem. 2008 Sep 1;80(17):6715-23. doi: 10.1021/ac8007994.

14.

Hydrophilic interaction liquid chromatography (HILIC) in proteomics.

Boersema PJ, Mohammed S, Heck AJ.

Anal Bioanal Chem. 2008 May;391(1):151-9. doi: 10.1007/s00216-008-1865-7. Review.

15.
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17.

Peptide retention prediction applied to proteomic data analysis.

Gilar M, Jaworski A, Olivova P, Gebler JC.

Rapid Commun Mass Spectrom. 2007;21(17):2813-21.

PMID:
17663486
18.

Multidimensional separations-based shotgun proteomics.

Fournier ML, Gilmore JM, Martin-Brown SA, Washburn MP.

Chem Rev. 2007 Aug;107(8):3654-86. Review. No abstract available.

PMID:
17649983
19.

Chemically etched open tubular and monolithic emitters for nanoelectrospray ionization mass spectrometry.

Kelly RT, Page JS, Luo Q, Moore RJ, Orton DJ, Tang K, Smith RD.

Anal Chem. 2006 Nov 15;78(22):7796-801.

20.

Optimized peptide separation and identification for mass spectrometry based proteomics via free-flow electrophoresis.

Malmström J, Lee H, Nesvizhskii AI, Shteynberg D, Mohanty S, Brunner E, Ye M, Weber G, Eckerskorn C, Aebersold R.

J Proteome Res. 2006 Sep;5(9):2241-9.

PMID:
16944936
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