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Items: 1 to 20 of 38

1.

Conservation and divergence of methylation patterning in plants and animals.

Feng S, Cokus SJ, Zhang X, Chen PY, Bostick M, Goll MG, Hetzel J, Jain J, Strauss SH, Halpern ME, Ukomadu C, Sadler KC, Pradhan S, Pellegrini M, Jacobsen SE.

Proc Natl Acad Sci U S A. 2010 May 11;107(19):8689-94. doi: 10.1073/pnas.1002720107. Epub 2010 Apr 15.

2.

Establishing, maintaining and modifying DNA methylation patterns in plants and animals.

Law JA, Jacobsen SE.

Nat Rev Genet. 2010 Mar;11(3):204-20. doi: 10.1038/nrg2719. Review.

3.

Human DNA methylomes at base resolution show widespread epigenomic differences.

Lister R, Pelizzola M, Dowen RH, Hawkins RD, Hon G, Tonti-Filippini J, Nery JR, Lee L, Ye Z, Ngo QM, Edsall L, Antosiewicz-Bourget J, Stewart R, Ruotti V, Millar AH, Thomson JA, Ren B, Ecker JR.

Nature. 2009 Nov 19;462(7271):315-22. doi: 10.1038/nature08514. Epub 2009 Oct 14.

4.

SRA-domain proteins required for DRM2-mediated de novo DNA methylation.

Johnson LM, Law JA, Khattar A, Henderson IR, Jacobsen SE.

PLoS Genet. 2008 Nov;4(11):e1000280. doi: 10.1371/journal.pgen.1000280. Epub 2008 Nov 28.

5.

Epigenetic mechanisms in mammals.

Kim JK, Samaranayake M, Pradhan S.

Cell Mol Life Sci. 2009 Feb;66(4):596-612. doi: 10.1007/s00018-008-8432-4. Review.

6.

Structure and hemimethylated CpG binding of the SRA domain from human UHRF1.

Qian C, Li S, Jakoncic J, Zeng L, Walsh MJ, Zhou MM.

J Biol Chem. 2008 Dec 12;283(50):34490-4. doi: 10.1074/jbc.C800169200. Epub 2008 Oct 22.

7.

Genome-wide association of histone H3 lysine nine methylation with CHG DNA methylation in Arabidopsis thaliana.

Bernatavichute YV, Zhang X, Cokus S, Pellegrini M, Jacobsen SE.

PLoS One. 2008 Sep 8;3(9):e3156. doi: 10.1371/journal.pone.0003156.

8.

Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism.

Arita K, Ariyoshi M, Tochio H, Nakamura Y, Shirakawa M.

Nature. 2008 Oct 9;455(7214):818-21. doi: 10.1038/nature07249. Epub 2008 Sep 3.

PMID:
18772891
9.

Structural basis for recognition of hemi-methylated DNA by the SRA domain of human UHRF1.

Avvakumov GV, Walker JR, Xue S, Li Y, Duan S, Bronner C, Arrowsmith CH, Dhe-Paganon S.

Nature. 2008 Oct 9;455(7214):822-5. doi: 10.1038/nature07273. Epub 2008 Sep 3.

PMID:
18772889
10.

The SRA domain of UHRF1 flips 5-methylcytosine out of the DNA helix.

Hashimoto H, Horton JR, Zhang X, Bostick M, Jacobsen SE, Cheng X.

Nature. 2008 Oct 9;455(7214):826-9. doi: 10.1038/nature07280. Epub 2008 Sep 3.

11.

Three SRA-domain methylcytosine-binding proteins cooperate to maintain global CpG methylation and epigenetic silencing in Arabidopsis.

Woo HR, Dittmer TA, Richards EJ.

PLoS Genet. 2008 Aug 15;4(8):e1000156. doi: 10.1371/journal.pgen.1000156.

12.

ORTH/VIM proteins that regulate DNA methylation are functional ubiquitin E3 ligases.

Kraft E, Bostick M, Jacobsen SE, Callis J.

Plant J. 2008 Dec;56(5):704-15. doi: 10.1111/j.1365-313X.2008.03631.x. Epub 2008 Sep 19.

13.

Mammalian DNA methyltransferases: a structural perspective.

Cheng X, Blumenthal RM.

Structure. 2008 Mar;16(3):341-50. doi: 10.1016/j.str.2008.01.004. Review.

14.

MeCP2 binding to DNA depends upon hydration at methyl-CpG.

Ho KL, McNae IW, Schmiedeberg L, Klose RJ, Bird AP, Walkinshaw MD.

Mol Cell. 2008 Feb 29;29(4):525-31. doi: 10.1016/j.molcel.2007.12.028.

15.

The SRA protein Np95 mediates epigenetic inheritance by recruiting Dnmt1 to methylated DNA.

Sharif J, Muto M, Takebayashi S, Suetake I, Iwamatsu A, Endo TA, Shinga J, Mizutani-Koseki Y, Toyoda T, Okamura K, Tajima S, Mitsuya K, Okano M, Koseki H.

Nature. 2007 Dec 6;450(7171):908-12. Epub 2007 Nov 11.

PMID:
17994007
16.

Recognition of DNA damage by the Rad4 nucleotide excision repair protein.

Min JH, Pavletich NP.

Nature. 2007 Oct 4;449(7162):570-5. Epub 2007 Sep 19.

PMID:
17882165
17.

UHRF1 plays a role in maintaining DNA methylation in mammalian cells.

Bostick M, Kim JK, Estève PO, Clark A, Pradhan S, Jacobsen SE.

Science. 2007 Sep 21;317(5845):1760-4. Epub 2007 Aug 2.

18.

Epigenetic inheritance in plants.

Henderson IR, Jacobsen SE.

Nature. 2007 May 24;447(7143):418-24. Review.

PMID:
17522675
19.

VIM1, a methylcytosine-binding protein required for centromeric heterochromatinization.

Woo HR, Pontes O, Pikaard CS, Richards EJ.

Genes Dev. 2007 Feb 1;21(3):267-77. Epub 2007 Jan 22.

20.

The SRA methyl-cytosine-binding domain links DNA and histone methylation.

Johnson LM, Bostick M, Zhang X, Kraft E, Henderson I, Callis J, Jacobsen SE.

Curr Biol. 2007 Feb 20;17(4):379-84. Epub 2007 Jan 18.

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