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Items: 1 to 20 of 48

1.

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database.

Eng JK, McCormack AL, Yates JR.

J Am Soc Mass Spectrom. 1994 Nov;5(11):976-89. doi: 10.1016/1044-0305(94)80016-2.

PMID:
24226387
2.

Brain phosphoproteome obtained by a FASP-based method reveals plasma membrane protein topology.

Wiśniewski JR, Nagaraj N, Zougman A, Gnad F, Mann M.

J Proteome Res. 2010 Jun 4;9(6):3280-9. doi: 10.1021/pr1002214.

PMID:
20415495
3.

A global map of human gene expression.

Lukk M, Kapushesky M, Nikkilä J, Parkinson H, Goncalves A, Huber W, Ukkonen E, Brazma A.

Nat Biotechnol. 2010 Apr;28(4):322-4. doi: 10.1038/nbt0410-322. No abstract available.

4.

Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

Olsen JV, Vermeulen M, Santamaria A, Kumar C, Miller ML, Jensen LJ, Gnad F, Cox J, Jensen TS, Nigg EA, Brunak S, Mann M.

Sci Signal. 2010 Jan 12;3(104):ra3. doi: 10.1126/scisignal.2000475.

5.

KEGG for representation and analysis of molecular networks involving diseases and drugs.

Kanehisa M, Goto S, Furumichi M, Tanabe M, Hirakawa M.

Nucleic Acids Res. 2010 Jan;38(Database issue):D355-60. doi: 10.1093/nar/gkp896. Epub 2009 Oct 30.

6.

BAD: undertaker by night, candyman by day.

Danial NN.

Oncogene. 2008 Dec;27 Suppl 1:S53-70. doi: 10.1038/onc.2009.44. Review.

PMID:
19641507
7.

Structure and regulation of MARK, a kinase involved in abnormal phosphorylation of Tau protein.

Timm T, Marx A, Panneerselvam S, Mandelkow E, Mandelkow EM.

BMC Neurosci. 2008 Dec 3;9 Suppl 2:S9. doi: 10.1186/1471-2202-9-S2-S9. Review.

8.

Predicting protein post-translational modifications using meta-analysis of proteome scale data sets.

Schwartz D, Chou MF, Church GM.

Mol Cell Proteomics. 2009 Feb;8(2):365-79. doi: 10.1074/mcp.M800332-MCP200. Epub 2008 Oct 28.

9.

Comparative proteomic phenotyping of cell lines and primary cells to assess preservation of cell type-specific functions.

Pan C, Kumar C, Bohl S, Klingmueller U, Mann M.

Mol Cell Proteomics. 2009 Mar;8(3):443-50. doi: 10.1074/mcp.M800258-MCP200. Epub 2008 Oct 23.

10.

STRING 8--a global view on proteins and their functional interactions in 630 organisms.

Jensen LJ, Kuhn M, Stark M, Chaffron S, Creevey C, Muller J, Doerks T, Julien P, Roth A, Simonovic M, Bork P, von Mering C.

Nucleic Acids Res. 2009 Jan;37(Database issue):D412-6. doi: 10.1093/nar/gkn760. Epub 2008 Oct 21.

11.

The SCX/IMAC enrichment approach for global phosphorylation analysis by mass spectrometry.

Villén J, Gygi SP.

Nat Protoc. 2008;3(10):1630-8. doi: 10.1038/nprot.2008.150.

12.

Linear motif atlas for phosphorylation-dependent signaling.

Miller ML, Jensen LJ, Diella F, Jørgensen C, Tinti M, Li L, Hsiung M, Parker SA, Bordeaux J, Sicheritz-Ponten T, Olhovsky M, Pasculescu A, Alexander J, Knapp S, Blom N, Bork P, Li S, Cesareni G, Pawson T, Turk BE, Yaffe MB, Brunak S, Linding R.

Sci Signal. 2008 Sep 2;1(35):ra2. doi: 10.1126/scisignal.1159433.

13.

Regulation and function of triacylglycerol lipases in cellular metabolism.

Watt MJ, Steinberg GR.

Biochem J. 2008 Sep 15;414(3):313-25. doi: 10.1042/BJ20080305. Review.

PMID:
18717647
14.

Non-functional phosphorylations?

Lienhard GE.

Trends Biochem Sci. 2008 Aug;33(8):351-2. doi: 10.1016/j.tibs.2008.05.004. Epub 2008 Jul 4. No abstract available.

PMID:
18603430
15.

Glycogen synthase kinase (GSK) 3beta directly phosphorylates Serine 212 in the regulatory loop and inhibits microtubule affinity-regulating kinase (MARK) 2.

Timm T, Balusamy K, Li X, Biernat J, Mandelkow E, Mandelkow EM.

J Biol Chem. 2008 Jul 4;283(27):18873-82. doi: 10.1074/jbc.M706596200. Epub 2008 Apr 18.

16.

Deep coverage mouse red blood cell proteome: a first comparison with the human red blood cell.

Pasini EM, Kirkegaard M, Salerno D, Mortensen P, Mann M, Thomas AW.

Mol Cell Proteomics. 2008 Jul;7(7):1317-30. doi: 10.1074/mcp.M700458-MCP200. Epub 2008 Mar 14.

17.

Phospho.ELM: a database of phosphorylation sites--update 2008.

Diella F, Gould CM, Chica C, Via A, Gibson TJ.

Nucleic Acids Res. 2008 Jan;36(Database issue):D240-4. Epub 2007 Oct 25.

18.

Glycogen synthase kinase 3: a key regulator of cellular fate.

Forde JE, Dale TC.

Cell Mol Life Sci. 2007 Aug;64(15):1930-44. Review.

PMID:
17530463
19.

The human disease network.

Goh KI, Cusick ME, Valle D, Childs B, Vidal M, Barabási AL.

Proc Natl Acad Sci U S A. 2007 May 22;104(21):8685-90. Epub 2007 May 14.

20.

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