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Items: 1 to 20 of 65

1.

A comprehensive survey of 3' animal miRNA modification events and a possible role for 3' adenylation in modulating miRNA targeting effectiveness.

Burroughs AM, Ando Y, de Hoon MJ, Tomaru Y, Nishibu T, Ukekawa R, Funakoshi T, Kurokawa T, Suzuki H, Hayashizaki Y, Daub CO.

Genome Res. 2010 Oct;20(10):1398-410. doi: 10.1101/gr.106054.110. Epub 2010 Aug 18.

2.

Target RNA-directed trimming and tailing of small silencing RNAs.

Ameres SL, Horwich MD, Hung JH, Xu J, Ghildiyal M, Weng Z, Zamore PD.

Science. 2010 Jun 18;328(5985):1534-9. doi: 10.1126/science.1187058.

3.

Mammalian microRNAs: experimental evaluation of novel and previously annotated genes.

Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP.

Genes Dev. 2010 May 15;24(10):992-1009. doi: 10.1101/gad.1884710. Epub 2010 Apr 22.

4.

MicroRNA activity is suppressed in mouse oocytes.

Ma J, Flemr M, Stein P, Berninger P, Malik R, Zavolan M, Svoboda P, Schultz RM.

Curr Biol. 2010 Feb 9;20(3):265-70. doi: 10.1016/j.cub.2009.12.042. Epub 2010 Jan 28.

5.

MicroRNA function is globally suppressed in mouse oocytes and early embryos.

Suh N, Baehner L, Moltzahn F, Melton C, Shenoy A, Chen J, Blelloch R.

Curr Biol. 2010 Feb 9;20(3):271-7. doi: 10.1016/j.cub.2009.12.044. Epub 2010 Jan 28.

6.

Molecular mechanisms that funnel RNA precursors into endogenous small-interfering RNA and microRNA biogenesis pathways in Drosophila.

Miyoshi K, Miyoshi T, Hartig JV, Siomi H, Siomi MC.

RNA. 2010 Mar;16(3):506-15. doi: 10.1261/rna.1952110. Epub 2010 Jan 19.

7.

Virus discovery by deep sequencing and assembly of virus-derived small silencing RNAs.

Wu Q, Luo Y, Lu R, Lau N, Lai EC, Li WX, Ding SW.

Proc Natl Acad Sci U S A. 2010 Jan 26;107(4):1606-11. doi: 10.1073/pnas.0911353107. Epub 2010 Jan 4.

8.

Loqs and R2D2 act sequentially in the siRNA pathway in Drosophila.

Marques JT, Kim K, Wu PH, Alleyne TM, Jafari N, Carthew RW.

Nat Struct Mol Biol. 2010 Jan;17(1):24-30. doi: 10.1038/nsmb.1735. Epub 2009 Dec 27.

9.

Sorting of Drosophila small silencing RNAs partitions microRNA* strands into the RNA interference pathway.

Ghildiyal M, Xu J, Seitz H, Weng Z, Zamore PD.

RNA. 2010 Jan;16(1):43-56. doi: 10.1261/rna.1972910. Epub 2009 Nov 16.

10.

Hierarchical rules for Argonaute loading in Drosophila.

Czech B, Zhou R, Erlich Y, Brennecke J, Binari R, Villalta C, Gordon A, Perrimon N, Hannon GJ.

Mol Cell. 2009 Nov 13;36(3):445-56. doi: 10.1016/j.molcel.2009.09.028.

11.

Distinct mechanisms for microRNA strand selection by Drosophila Argonautes.

Okamura K, Liu N, Lai EC.

Mol Cell. 2009 Nov 13;36(3):431-44. doi: 10.1016/j.molcel.2009.09.027.

12.

The endo-siRNA pathway is essential for robust development of the Drosophila embryo.

Lucchetta EM, Carthew RW, Ismagilov RF.

PLoS One. 2009 Oct 23;4(10):e7576. doi: 10.1371/journal.pone.0007576.

13.

Structural determinants of miRNAs for RISC loading and slicer-independent unwinding.

Kawamata T, Seitz H, Tomari Y.

Nat Struct Mol Biol. 2009 Sep;16(9):953-60. doi: 10.1038/nsmb.1630. Epub 2009 Aug 16.

PMID:
19684602
14.

Endo-siRNAs depend on a new isoform of loquacious and target artificially introduced, high-copy sequences.

Hartig JV, Esslinger S, Böttcher R, Saito K, Förstemann K.

EMBO J. 2009 Oct 7;28(19):2932-44. doi: 10.1038/emboj.2009.220. Epub 2009 Jul 30.

15.

Processing of Drosophila endo-siRNAs depends on a specific Loquacious isoform.

Zhou R, Czech B, Brennecke J, Sachidanandam R, Wohlschlegel JA, Perrimon N, Hannon GJ.

RNA. 2009 Oct;15(10):1886-95. doi: 10.1261/rna.1611309. Epub 2009 Jul 27.

16.

Abundant primary piRNAs, endo-siRNAs, and microRNAs in a Drosophila ovary cell line.

Lau NC, Robine N, Martin R, Chung WJ, Niki Y, Berezikov E, Lai EC.

Genome Res. 2009 Oct;19(10):1776-85. doi: 10.1101/gr.094896.109. Epub 2009 Jun 18.

17.

Transfection of small RNAs globally perturbs gene regulation by endogenous microRNAs.

Khan AA, Betel D, Miller ML, Sander C, Leslie CS, Marks DS.

Nat Biotechnol. 2009 Jun;27(6):549-55. doi: 10.1038/nbt.1543. Erratum in: Nat Biotechnol. 2009 Jul;27(7):671.

18.

Drosophila argonaute1 and argonaute2 employ distinct mechanisms for translational repression.

Iwasaki S, Kawamata T, Tomari Y.

Mol Cell. 2009 Apr 10;34(1):58-67. doi: 10.1016/j.molcel.2009.02.010. Epub 2009 Mar 5.

19.

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome.

Langmead B, Trapnell C, Pop M, Salzberg SL.

Genome Biol. 2009;10(3):R25. doi: 10.1186/gb-2009-10-3-r25. Epub 2009 Mar 4.

20.

Dicing of viral replication intermediates during silencing of latent Drosophila viruses.

Flynt A, Liu N, Martin R, Lai EC.

Proc Natl Acad Sci U S A. 2009 Mar 31;106(13):5270-5. doi: 10.1073/pnas.0813412106. Epub 2009 Feb 27.

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