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Items: 1 to 20 of 47

1.

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database.

Eng JK, McCormack AL, Yates JR.

J Am Soc Mass Spectrom. 1994 Nov;5(11):976-89. doi: 10.1016/1044-0305(94)80016-2.

PMID:
24226387
2.

Quantitative phosphoproteomic analysis reveals vasopressin V2-receptor-dependent signaling pathways in renal collecting duct cells.

Rinschen MM, Yu MJ, Wang G, Boja ES, Hoffert JD, Pisitkun T, Knepper MA.

Proc Natl Acad Sci U S A. 2010 Feb 23;107(8):3882-7. doi: 10.1073/pnas.0910646107. Epub 2010 Feb 5.

3.

Proteomic profiling of nuclei from native renal inner medullary collecting duct cells using LC-MS/MS.

Tchapyjnikov D, Li Y, Pisitkun T, Hoffert JD, Yu MJ, Knepper MA.

Physiol Genomics. 2010 Feb 4;40(3):167-83. doi: 10.1152/physiolgenomics.00148.2009. Epub 2009 Dec 8.

4.

Concordant regulation of translation and mRNA abundance for hundreds of targets of a human microRNA.

Hendrickson DG, Hogan DJ, McCullough HL, Myers JW, Herschlag D, Ferrell JE, Brown PO.

PLoS Biol. 2009 Nov;7(11):e1000238. doi: 10.1371/journal.pbio.1000238. Epub 2009 Nov 10.

5.

Systems-level analysis of cell-specific AQP2 gene expression in renal collecting duct.

Yu MJ, Miller RL, Uawithya P, Rinschen MM, Khositseth S, Braucht DW, Chou CL, Pisitkun T, Nelson RD, Knepper MA.

Proc Natl Acad Sci U S A. 2009 Feb 17;106(7):2441-6. doi: 10.1073/pnas.0813002106. Epub 2009 Feb 3.

6.

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.

Huang da W, Sherman BT, Lempicki RA.

Nat Protoc. 2009;4(1):44-57. doi: 10.1038/nprot.2008.211.

7.

Large-scale proteomics and phosphoproteomics of urinary exosomes.

Gonzales PA, Pisitkun T, Hoffert JD, Tchapyjnikov D, Star RA, Kleta R, Wang NS, Knepper MA.

J Am Soc Nephrol. 2009 Feb;20(2):363-79. doi: 10.1681/ASN.2008040406. Epub 2008 Dec 3.

8.

Global protein stability profiling in mammalian cells.

Yen HC, Xu Q, Chou DM, Zhao Z, Elledge SJ.

Science. 2008 Nov 7;322(5903):918-23. doi: 10.1126/science.1160489.

9.

NF-kappaB modulates aquaporin-2 transcription in renal collecting duct principal cells.

Hasler U, Leroy V, Jeon US, Bouley R, Dimitrov M, Kim JA, Brown D, Kwon HM, Martin PY, FĂ©raille E.

J Biol Chem. 2008 Oct 17;283(42):28095-105. doi: 10.1074/jbc.M708350200. Epub 2008 Aug 14.

10.

Reciprocal interaction with G-actin and tropomyosin is essential for aquaporin-2 trafficking.

Noda Y, Horikawa S, Kanda E, Yamashita M, Meng H, Eto K, Li Y, Kuwahara M, Hirai K, Pack C, Kinjo M, Okabe S, Sasaki S.

J Cell Biol. 2008 Aug 11;182(3):587-601. doi: 10.1083/jcb.200709177. Epub 2008 Aug 4.

11.

Akt and ERK1/2 pathways are components of the vasopressin signaling network in rat native IMCD.

Pisitkun T, Jacob V, Schleicher SM, Chou CL, Yu MJ, Knepper MA.

Am J Physiol Renal Physiol. 2008 Oct;295(4):F1030-43. doi: 10.1152/ajprenal.90339.2008. Epub 2008 Jul 30.

12.

Vasopressin-stimulated increase in phosphorylation at Ser269 potentiates plasma membrane retention of aquaporin-2.

Hoffert JD, Fenton RA, Moeller HB, Simons B, Tchapyjnikov D, McDill BW, Yu MJ, Pisitkun T, Chen F, Knepper MA.

J Biol Chem. 2008 Sep 5;283(36):24617-27. doi: 10.1074/jbc.M803074200. Epub 2008 Jul 7.

13.

Large-scale quantitative LC-MS/MS analysis of detergent-resistant membrane proteins from rat renal collecting duct.

Yu MJ, Pisitkun T, Wang G, Aranda JF, Gonzales PA, Tchapyjnikov D, Shen RF, Alonso MA, Knepper MA.

Am J Physiol Cell Physiol. 2008 Sep;295(3):C661-78. doi: 10.1152/ajpcell.90650.2007. Epub 2008 Jul 2.

14.

Roles of basolateral solute uptake via NKCC1 and of myosin II in vasopressin-induced cell swelling in inner medullary collecting duct.

Chou CL, Yu MJ, Kassai EM, Morris RG, Hoffert JD, Wall SM, Knepper MA.

Am J Physiol Renal Physiol. 2008 Jul;295(1):F192-201. doi: 10.1152/ajprenal.00011.2008. Epub 2008 Apr 16.

15.

Transcriptional profiling of native inner medullary collecting duct cells from rat kidney.

Uawithya P, Pisitkun T, Ruttenberg BE, Knepper MA.

Physiol Genomics. 2008 Jan 17;32(2):229-53. Epub 2007 Oct 23.

16.

An experimental correction for arginine-to-proline conversion artifacts in SILAC-based quantitative proteomics.

Van Hoof D, Pinkse MW, Oostwaard DW, Mummery CL, Heck AJ, Krijgsveld J.

Nat Methods. 2007 Sep;4(9):677-8. No abstract available.

PMID:
17762871
17.
18.

Automated quantification tool for high-throughput proteomics using stable isotope labeling and LC-MSn.

Wang G, Wu WW, Pisitkun T, Hoffert JD, Knepper MA, Shen RF.

Anal Chem. 2006 Aug 15;78(16):5752-61.

PMID:
16906720
19.

Human glutathione S-transferase P1-1 interacts with TRAF2 and regulates TRAF2-ASK1 signals.

Wu Y, Fan Y, Xue B, Luo L, Shen J, Zhang S, Jiang Y, Yin Z.

Oncogene. 2006 Sep 21;25(42):5787-800. Epub 2006 Apr 24.

PMID:
16636664
20.

Quantitative proteomics reveals posttranslational control as a regulatory factor in primary hematopoietic stem cells.

Unwin RD, Smith DL, Blinco D, Wilson CL, Miller CJ, Evans CA, Jaworska E, Baldwin SA, Barnes K, Pierce A, Spooncer E, Whetton AD.

Blood. 2006 Jun 15;107(12):4687-94. Epub 2006 Feb 28.

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