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An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database.

Eng JK, McCormack AL, Yates JR.

J Am Soc Mass Spectrom. 1994 Nov;5(11):976-89. doi: 10.1016/1044-0305(94)80016-2.


Eukaryotic stress granules: the ins and outs of translation.

Buchan JR, Parker R.

Mol Cell. 2009 Dec 25;36(6):932-41. doi: 10.1016/j.molcel.2009.11.020. Review.


Robust heat shock induces eIF2alpha-phosphorylation-independent assembly of stress granules containing eIF3 and 40S ribosomal subunits in budding yeast, Saccharomyces cerevisiae.

Grousl T, Ivanov P, Frýdlová I, Vasicová P, Janda F, Vojtová J, Malínská K, Malcová I, Nováková L, Janosková D, Valásek L, Hasek J.

J Cell Sci. 2009 Jun 15;122(Pt 12):2078-88. doi: 10.1242/jcs.045104. Epub 2009 May 26.


P bodies promote stress granule assembly in Saccharomyces cerevisiae.

Buchan JR, Muhlrad D, Parker R.

J Cell Biol. 2008 Nov 3;183(3):441-55. doi: 10.1083/jcb.200807043.


Structure and function of a transcriptional network activated by the MAPK Hog1.

Capaldi AP, Kaplan T, Liu Y, Habib N, Regev A, Friedman N, O'Shea EK.

Nat Genet. 2008 Nov;40(11):1300-6. doi: 10.1038/ng.235. Epub 2008 Oct 19.


Structural basis of dcp2 recognition and activation by dcp1.

She M, Decker CJ, Svergun DI, Round A, Chen N, Muhlrad D, Parker R, Song H.

Mol Cell. 2008 Feb 15;29(3):337-49. doi: 10.1016/j.molcel.2008.01.002.


mRNA decapping is promoted by an RNA-binding channel in Dcp2.

Deshmukh MV, Jones BN, Quang-Dang DU, Flinders J, Floor SN, Kim C, Jemielity J, Kalek M, Darzynkiewicz E, Gross JD.

Mol Cell. 2008 Feb 15;29(3):324-36. doi: 10.1016/j.molcel.2007.11.027.


Stress-dependent relocalization of translationally primed mRNPs to cytoplasmic granules that are kinetically and spatially distinct from P-bodies.

Hoyle NP, Castelli LM, Campbell SG, Holmes LE, Ashe MP.

J Cell Biol. 2007 Oct 8;179(1):65-74. Epub 2007 Oct 1.


Interactions between brome mosaic virus RNAs and cytoplasmic processing bodies.

Beckham CJ, Light HR, Nissan TA, Ahlquist P, Parker R, Noueiry A.

J Virol. 2007 Sep;81(18):9759-68. Epub 2007 Jul 3.


Accumulation of polyadenylated mRNA, Pab1p, eIF4E, and eIF4G with P-bodies in Saccharomyces cerevisiae.

Brengues M, Parker R.

Mol Biol Cell. 2007 Jul;18(7):2592-602. Epub 2007 May 2.


Pulmonary biomarkers based on alterations in protein expression after exposure to arsenic.

Lantz RC, Lynch BJ, Boitano S, Poplin GS, Littau S, Tsaprailis G, Burgess JL.

Environ Health Perspect. 2007 Apr;115(4):586-91. Epub 2007 Jan 8.


Analysis of P-body assembly in Saccharomyces cerevisiae.

Teixeira D, Parker R.

Mol Biol Cell. 2007 Jun;18(6):2274-87. Epub 2007 Apr 11.


Stress-induced reversal of microRNA repression and mRNA P-body localization in human cells.

Bhattacharyya SN, Habermacher R, Martine U, Closs EI, Filipowicz W.

Cold Spring Harb Symp Quant Biol. 2006;71:513-21. Review.


P bodies and the control of mRNA translation and degradation.

Parker R, Sheth U.

Mol Cell. 2007 Mar 9;25(5):635-46. Review.


The highways and byways of mRNA decay.

Garneau NL, Wilusz J, Wilusz CJ.

Nat Rev Mol Cell Biol. 2007 Feb;8(2):113-26. Review.


P bodies: at the crossroads of post-transcriptional pathways.

Eulalio A, Behm-Ansmant I, Izaurralde E.

Nat Rev Mol Cell Biol. 2007 Jan;8(1):9-22. Review.


Eukaryotic initiation factor 2alpha-independent pathway of stress granule induction by the natural product pateamine A.

Dang Y, Kedersha N, Low WK, Romo D, Gorospe M, Kaufman R, Anderson P, Liu JO.

J Biol Chem. 2006 Oct 27;281(43):32870-8. Epub 2006 Sep 2.


Translation-independent inhibition of mRNA deadenylation during stress in Saccharomyces cerevisiae.

Hilgers V, Teixeira D, Parker R.

RNA. 2006 Oct;12(10):1835-45. Epub 2006 Aug 29.


Inhibition of ribosome recruitment induces stress granule formation independently of eukaryotic initiation factor 2alpha phosphorylation.

Mazroui R, Sukarieh R, Bordeleau ME, Kaufman RJ, Northcote P, Tanaka J, Gallouzi I, Pelletier J.

Mol Biol Cell. 2006 Oct;17(10):4212-9. Epub 2006 Jul 26.

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