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Items: 1 to 20 of 48

1.

An RNA-dependent RNA polymerase formed by TERT and the RMRP RNA.

Maida Y, Yasukawa M, Furuuchi M, Lassmann T, Possemato R, Okamoto N, Kasim V, Hayashizaki Y, Hahn WC, Masutomi K.

Nature. 2009 Sep 10;461(7261):230-5. doi: 10.1038/nature08283. Epub 2009 Aug 23.

2.

Detection of single nucleotide variations in expressed exons of the human genome using RNA-Seq.

Chepelev I, Wei G, Tang Q, Zhao K.

Nucleic Acids Res. 2009 Sep;37(16):e106. doi: 10.1093/nar/gkp507. Epub 2009 Jun 15.

3.

C19MC microRNAs are processed from introns of large Pol-II, non-protein-coding transcripts.

Bortolin-Cavaillé ML, Dance M, Weber M, Cavaillé J.

Nucleic Acids Res. 2009 Jun;37(10):3464-73. doi: 10.1093/nar/gkp205. Epub 2009 Apr 1.

4.

Genomic location analysis by ChIP-Seq.

Barski A, Zhao K.

J Cell Biochem. 2009 May 1;107(1):11-8. doi: 10.1002/jcb.22077. Review.

5.

Chromatin structure analyses identify miRNA promoters.

Ozsolak F, Poling LL, Wang Z, Liu H, Liu XS, Roeder RG, Zhang X, Song JS, Fisher DE.

Genes Dev. 2008 Nov 15;22(22):3172-83. doi: 10.1101/gad.1706508.

6.

Genome-wide identification of in vivo protein-DNA binding sites from ChIP-Seq data.

Jothi R, Cuddapah S, Barski A, Cui K, Zhao K.

Nucleic Acids Res. 2008 Sep;36(16):5221-31. doi: 10.1093/nar/gkn488. Epub 2008 Aug 6.

7.

Different functional modes of p300 in activation of RNA polymerase III transcription from chromatin templates.

Mertens C, Roeder RG.

Mol Cell Biol. 2008 Sep;28(18):5764-76. doi: 10.1128/MCB.01262-07. Epub 2008 Jul 21.

8.

Genome-wide location analysis reveals a role of TFIIS in RNA polymerase III transcription.

Ghavi-Helm Y, Michaut M, Acker J, Aude JC, Thuriaux P, Werner M, Soutourina J.

Genes Dev. 2008 Jul 15;22(14):1934-47. doi: 10.1101/gad.471908.

9.

The epigenetics of rRNA genes: from molecular to chromosome biology.

McStay B, Grummt I.

Annu Rev Cell Dev Biol. 2008;24:131-57. doi: 10.1146/annurev.cellbio.24.110707.175259. Review.

PMID:
18616426
10.

Combinatorial patterns of histone acetylations and methylations in the human genome.

Wang Z, Zang C, Rosenfeld JA, Schones DE, Barski A, Cuddapah S, Cui K, Roh TY, Peng W, Zhang MQ, Zhao K.

Nat Genet. 2008 Jul;40(7):897-903. doi: 10.1038/ng.154. Epub 2008 Jun 15.

11.

Boundaries. Boundaries...Boundaries???

Lunyak VV.

Curr Opin Cell Biol. 2008 Jun;20(3):281-7. doi: 10.1016/j.ceb.2008.03.018. Epub 2008 Jun 2. Review.

PMID:
18524562
12.

Extragenic accumulation of RNA polymerase II enhances transcription by RNA polymerase III.

Listerman I, Bledau AS, Grishina I, Neugebauer KM.

PLoS Genet. 2007 Nov;3(11):e212.

13.

RNA polymerase is poised for activation across the genome.

Muse GW, Gilchrist DA, Nechaev S, Shah R, Parker JS, Grissom SF, Zeitlinger J, Adelman K.

Nat Genet. 2007 Dec;39(12):1507-11. Epub 2007 Nov 11.

14.

RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo.

Zeitlinger J, Stark A, Kellis M, Hong JW, Nechaev S, Adelman K, Levine M, Young RA.

Nat Genet. 2007 Dec;39(12):1512-6. Epub 2007 Nov 11.

15.

The expanding RNA polymerase III transcriptome.

Dieci G, Fiorino G, Castelnuovo M, Teichmann M, Pagano A.

Trends Genet. 2007 Dec;23(12):614-22. Epub 2007 Oct 30. Review.

PMID:
17977614
16.

TRRAP and GCN5 are used by c-Myc to activate RNA polymerase III transcription.

Kenneth NS, Ramsbottom BA, Gomez-Roman N, Marshall L, Cole PA, White RJ.

Proc Natl Acad Sci U S A. 2007 Sep 18;104(38):14917-22. Epub 2007 Sep 11.

17.

Genome-wide maps of chromatin state in pluripotent and lineage-committed cells.

Mikkelsen TS, Ku M, Jaffe DB, Issac B, Lieberman E, Giannoukos G, Alvarez P, Brockman W, Kim TK, Koche RP, Lee W, Mendenhall E, O'Donovan A, Presser A, Russ C, Xie X, Meissner A, Wernig M, Jaenisch R, Nusbaum C, Lander ES, Bernstein BE.

Nature. 2007 Aug 2;448(7153):553-60. Epub 2007 Jul 1.

18.

High-resolution profiling of histone methylations in the human genome.

Barski A, Cuddapah S, Cui K, Roh TY, Schones DE, Wang Z, Wei G, Chepelev I, Zhao K.

Cell. 2007 May 18;129(4):823-37.

19.

The role of chromatin during transcription.

Li B, Carey M, Workman JL.

Cell. 2007 Feb 23;128(4):707-19. Review.

20.

Chromatin modifications and their function.

Kouzarides T.

Cell. 2007 Feb 23;128(4):693-705. Review.

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