Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 41

1.

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database.

Eng JK, McCormack AL, Yates JR.

J Am Soc Mass Spectrom. 1994 Nov;5(11):976-89. doi: 10.1016/1044-0305(94)80016-2.

PMID:
24226387
2.
3.

Integrated platform for manual and high-throughput statistical validation of tandem mass spectra.

Yu K, Sabelli A, DeKeukelaere L, Park R, Sindi S, Gatsonis CA, Salomon A.

Proteomics. 2009 Jun;9(11):3115-25. doi: 10.1002/pmic.200800899.

4.

ProteinQuant Suite: a bundle of automated software tools for label-free quantitative proteomics.

Mann B, Madera M, Sheng Q, Tang H, Mechref Y, Novotny MV.

Rapid Commun Mass Spectrom. 2008 Dec;22(23):3823-34. doi: 10.1002/rcm.3781.

PMID:
18985620
5.

mzML: a single, unifying data format for mass spectrometer output.

Deutsch E.

Proteomics. 2008 Jul;8(14):2776-7. doi: 10.1002/pmic.200890049. No abstract available.

PMID:
18655045
6.

Quantitative time-resolved phosphoproteomic analysis of mast cell signaling.

Cao L, Yu K, Banh C, Nguyen V, Ritz A, Raphael BJ, Kawakami Y, Kawakami T, Salomon AR.

J Immunol. 2007 Nov 1;179(9):5864-76.

7.

The standard protein mix database: a diverse data set to assist in the production of improved Peptide and protein identification software tools.

Klimek J, Eddes JS, Hohmann L, Jackson J, Peterson A, Letarte S, Gafken PR, Katz JE, Mallick P, Lee H, Schmidt A, Ossola R, Eng JK, Aebersold R, Martin DB.

J Proteome Res. 2008 Jan;7(1):96-103. Epub 2007 Aug 21.

8.

Mendelian Inheritance in Man and its online version, OMIM.

McKusick VA.

Am J Hum Genet. 2007 Apr;80(4):588-604. Epub 2007 Mar 8. No abstract available.

9.
10.

GenBank.

Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, Wheeler DL.

Nucleic Acids Res. 2007 Jan;35(Database issue):D21-5.

11.

A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

Beausoleil SA, Villén J, Gerber SA, Rush J, Gygi SP.

Nat Biotechnol. 2006 Oct;24(10):1285-92. Epub 2006 Sep 10.

PMID:
16964243
12.

Phosphoproteomic analysis of lymphocyte signaling.

Cao L, Yu K, Salomon AR.

Adv Exp Med Biol. 2006;584:277-88. No abstract available.

PMID:
16802613
13.

A uniform proteomics MS/MS analysis platform utilizing open XML file formats.

Keller A, Eng J, Zhang N, Li XJ, Aebersold R.

Mol Syst Biol. 2005;1:2005.0017. Epub 2005 Aug 2.

14.

Informatics solutions for high-throughput proteomics.

Topaloglou T.

Drug Discov Today. 2006 Jun;11(11-12):509-16. Review.

PMID:
16713902
15.

CPAS: a proteomics data management system for the masses.

Cottingham K.

J Proteome Res. 2006 Jan;5(1):14. No abstract available.

PMID:
16435445
16.

Performance of a linear ion trap-Orbitrap hybrid for peptide analysis.

Yates JR, Cociorva D, Liao L, Zabrouskov V.

Anal Chem. 2006 Jan 15;78(2):493-500.

PMID:
16408932
17.

The Universal Protein Resource (UniProt): an expanding universe of protein information.

Wu CH, Apweiler R, Bairoch A, Natale DA, Barker WC, Boeckmann B, Ferro S, Gasteiger E, Huang H, Lopez R, Magrane M, Martin MJ, Mazumder R, O'Donovan C, Redaschi N, Suzek B.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D187-91.

18.

Current status of proteomic standards development.

Orchard S, Taylor C, Hermjakob H, Zhu W, Julian R, Apweiler R.

Expert Rev Proteomics. 2004 Aug;1(2):179-83. Review.

PMID:
15966812
20.

Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry.

Desiere F, Deutsch EW, Nesvizhskii AI, Mallick P, King NL, Eng JK, Aderem A, Boyle R, Brunner E, Donohoe S, Fausto N, Hafen E, Hood L, Katze MG, Kennedy KA, Kregenow F, Lee H, Lin B, Martin D, Ranish JA, Rawlings DJ, Samelson LE, Shiio Y, Watts JD, Wollscheid B, Wright ME, Yan W, Yang L, Yi EC, Zhang H, Aebersold R.

Genome Biol. 2005;6(1):R9. Epub 2004 Dec 10.

Supplemental Content

Support Center