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Items: 1 to 20 of 79

1.

Genome-wide prioritization of disease genes and identification of disease-disease associations from an integrated human functional linkage network.

Linghu B, Snitkin ES, Hu Z, Xia Y, Delisi C.

Genome Biol. 2009;10(9):R91. doi: 10.1186/gb-2009-10-9-r91. Epub 2009 Sep 3.

2.

A novel algorithm for detecting differentially regulated paths based on gene set enrichment analysis.

Keller A, Backes C, Gerasch A, Kaufmann M, Kohlbacher O, Meese E, Lenhof HP.

Bioinformatics. 2009 Nov 1;25(21):2787-94. doi: 10.1093/bioinformatics/btp510. Epub 2009 Aug 27.

3.

Detecting pathways transcriptionally correlated with clinical parameters.

Ulitsky I, Shamir R.

Comput Syst Bioinformatics Conf. 2008;7:249-58.

4.

Protein tyrosine phosphatase epsilon is a negative regulator of FcepsilonRI-mediated mast cell responses.

Akimoto M, Mishra K, Lim KT, Tani N, Hisanaga SI, Katagiri T, Elson A, Mizuno K, Yakura H.

Scand J Immunol. 2009 May;69(5):401-11. doi: 10.1111/j.1365-3083.2009.02235.x. Epub 2008 Feb 6.

5.

Cloning and pharmacological characterization of CCR7, CCL21 and CCL19 from Macaca fascicularis.

Moxley R, Day E, Brown K, Mahnke M, Zurini M, Schmitz R, Jones CE, Jarai G.

Eur J Pharm Sci. 2009 Jun 28;37(3-4):264-71. doi: 10.1016/j.ejps.2009.02.013. Epub 2009 Mar 6.

PMID:
19491014
6.

Cancer-related inflammation, the seventh hallmark of cancer: links to genetic instability.

Colotta F, Allavena P, Sica A, Garlanda C, Mantovani A.

Carcinogenesis. 2009 Jul;30(7):1073-81. doi: 10.1093/carcin/bgp127. Epub 2009 May 25. Review.

PMID:
19468060
7.

De novo fatty-acid synthesis and related pathways as molecular targets for cancer therapy.

Mashima T, Seimiya H, Tsuruo T.

Br J Cancer. 2009 May 5;100(9):1369-72. doi: 10.1038/sj.bjc.6605007. Epub 2009 Apr 7. Review.

8.

Frequent inactivation of axon guidance molecule RGMA in human colon cancer through genetic and epigenetic mechanisms.

Li VS, Yuen ST, Chan TL, Yan HH, Law WL, Yeung BH, Chan AS, Tsui WY, So S, Chen X, Leung SY.

Gastroenterology. 2009 Jul;137(1):176-87. doi: 10.1053/j.gastro.2009.03.005. Epub 2009 Mar 18.

PMID:
19303019
9.

Genetic variation in adipokine genes and risk of colorectal cancer.

Pechlivanis S, Bermejo JL, Pardini B, Naccarati A, Vodickova L, Novotny J, Hemminki K, Vodicka P, Försti A.

Eur J Endocrinol. 2009 Jun;160(6):933-40. doi: 10.1530/EJE-09-0039. Epub 2009 Mar 9. Erratum in: Eur J Endocrinol. 2009 Jul;161(1):211.

10.

Dendritic cells in rheumatoid arthritis: Which subset should be used as a tool to induce tolerance?

Lebre MC, Tak PP.

Hum Immunol. 2009 May;70(5):321-4. doi: 10.1016/j.humimm.2009.02.006. Epub 2009 Feb 21. Review.

PMID:
19236901
11.

A general modular framework for gene set enrichment analysis.

Ackermann M, Strimmer K.

BMC Bioinformatics. 2009 Feb 3;10:47. doi: 10.1186/1471-2105-10-47.

12.

Multivariate gene expression analysis reveals functional connectivity changes between normal/tumoral prostates.

Fujita A, Gomes LR, Sato JR, Yamaguchi R, Thomaz CE, Sogayar MC, Miyano S.

BMC Syst Biol. 2008 Dec 5;2:106. doi: 10.1186/1752-0509-2-106.

13.

Metabolite profiling of human colon carcinoma--deregulation of TCA cycle and amino acid turnover.

Denkert C, Budczies J, Weichert W, Wohlgemuth G, Scholz M, Kind T, Niesporek S, Noske A, Buckendahl A, Dietel M, Fiehn O.

Mol Cancer. 2008 Sep 18;7:72. doi: 10.1186/1476-4598-7-72.

14.

Cancer-related inflammation.

Mantovani A, Allavena P, Sica A, Balkwill F.

Nature. 2008 Jul 24;454(7203):436-44. doi: 10.1038/nature07205. Review.

15.

Identifying functional modules in protein-protein interaction networks: an integrated exact approach.

Dittrich MT, Klau GW, Rosenwald A, Dandekar T, Müller T.

Bioinformatics. 2008 Jul 1;24(13):i223-31. doi: 10.1093/bioinformatics/btn161.

16.

Immunomodulatory mast cells: negative, as well as positive, regulators of immunity.

Galli SJ, Grimbaldeston M, Tsai M.

Nat Rev Immunol. 2008 Jun;8(6):478-86. doi: 10.1038/nri2327. Review.

17.

A critical role of CCR7 in invasiveness and metastasis of SW620 colon cancer cell in vitro and in vivo.

Yu S, Duan J, Zhou Z, Pang Q, Wuyang J, Liu T, He X, Xinfa L, Chen Y.

Cancer Biol Ther. 2008 Jul;7(7):1037-43. Epub 2008 Apr 7.

PMID:
18437055
18.

KEGG for linking genomes to life and the environment.

Kanehisa M, Araki M, Goto S, Hattori M, Hirakawa M, Itoh M, Katayama T, Kawashima S, Okuda S, Tokimatsu T, Yamanishi Y.

Nucleic Acids Res. 2008 Jan;36(Database issue):D480-4. Epub 2007 Dec 12.

19.

The genomic landscapes of human breast and colorectal cancers.

Wood LD, Parsons DW, Jones S, Lin J, Sjöblom T, Leary RJ, Shen D, Boca SM, Barber T, Ptak J, Silliman N, Szabo S, Dezso Z, Ustyanksky V, Nikolskaya T, Nikolsky Y, Karchin R, Wilson PA, Kaminker JS, Zhang Z, Croshaw R, Willis J, Dawson D, Shipitsin M, Willson JK, Sukumar S, Polyak K, Park BH, Pethiyagoda CL, Pant PV, Ballinger DG, Sparks AB, Hartigan J, Smith DR, Suh E, Papadopoulos N, Buckhaults P, Markowitz SD, Parmigiani G, Kinzler KW, Velculescu VE, Vogelstein B.

Science. 2007 Nov 16;318(5853):1108-13. Epub 2007 Oct 11.

20.

EphB-ephrin-B interactions suppress colorectal cancer progression by compartmentalizing tumor cells.

Cortina C, Palomo-Ponce S, Iglesias M, Fernández-Masip JL, Vivancos A, Whissell G, Humà M, Peiró N, Gallego L, Jonkheer S, Davy A, Lloreta J, Sancho E, Batlle E.

Nat Genet. 2007 Nov;39(11):1376-83. Epub 2007 Sep 30.

PMID:
17906625

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