Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 32

1.

Population genomic inference of recombination rates and hotspots.

Wang Y, Rannala B.

Proc Natl Acad Sci U S A. 2009 Apr 14;106(15):6215-9. doi: 10.1073/pnas.0900418106. Epub 2009 Apr 2.

2.

Rapid evolution and the importance of recombination to the gastroenteric pathogen Campylobacter jejuni.

Wilson DJ, Gabriel E, Leatherbarrow AJ, Cheesbrough J, Gee S, Bolton E, Fox A, Hart CA, Diggle PJ, Fearnhead P.

Mol Biol Evol. 2009 Feb;26(2):385-97. doi: 10.1093/molbev/msn264. Epub 2008 Nov 13.

3.

Small CRISPR RNAs guide antiviral defense in prokaryotes.

Brouns SJ, Jore MM, Lundgren M, Westra ER, Slijkhuis RJ, Snijders AP, Dickman MJ, Makarova KS, Koonin EV, van der Oost J.

Science. 2008 Aug 15;321(5891):960-4. doi: 10.1126/science.1159689.

4.

Population genomic analysis of strain variation in Leptospirillum group II bacteria involved in acid mine drainage formation.

Simmons SL, Dibartolo G, Denef VJ, Goltsman DS, Thelen MP, Banfield JF.

PLoS Biol. 2008 Jul 22;6(7):e177. doi: 10.1371/journal.pbio.0060177.

5.

Accounting for bias from sequencing error in population genetic estimates.

Johnson PL, Slatkin M.

Mol Biol Evol. 2008 Jan;25(1):199-206. Epub 2007 Nov 2.

PMID:
17981928
6.

IMG/M: a data management and analysis system for metagenomes.

Markowitz VM, Ivanova NN, Szeto E, Palaniappan K, Chu K, Dalevi D, Chen IM, Grechkin Y, Dubchak I, Anderson I, Lykidis A, Mavromatis K, Hugenholtz P, Kyrpides NC.

Nucleic Acids Res. 2008 Jan;36(Database issue):D534-8. Epub 2007 Oct 11.

7.

Genetic exchange across a species boundary in the archaeal genus ferroplasma.

Eppley JM, Tyson GW, Getz WM, Banfield JF.

Genetics. 2007 Sep;177(1):407-16. Epub 2007 Jul 1.

8.

Inference of bacterial microevolution using multilocus sequence data.

Didelot X, Falush D.

Genetics. 2007 Mar;175(3):1251-66. Epub 2006 Dec 6.

9.

Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities.

García Martín H, Ivanova N, Kunin V, Warnecke F, Barry KW, McHardy AC, Yeates C, He S, Salamov AA, Szeto E, Dalin E, Putnam NH, Shapiro HJ, Pangilinan JL, Rigoutsos I, Kyrpides NC, Blackall LL, McMahon KD, Hugenholtz P.

Nat Biotechnol. 2006 Oct;24(10):1263-9. Epub 2006 Sep 24.

PMID:
16998472
10.

Inference of population genetic parameters in metagenomics: a clean look at messy data.

Johnson PL, Slatkin M.

Genome Res. 2006 Oct;16(10):1320-7. Epub 2006 Sep 5.

11.

The impact of homologous recombination on the generation of diversity in bacteria.

Hanage WP, Fraser C, Spratt BG.

J Theor Biol. 2006 Mar 21;239(2):210-9. Epub 2005 Oct 19.

PMID:
16236325
12.

A fine-scale map of recombination rates and hotspots across the human genome.

Myers S, Bottolo L, Freeman C, McVean G, Donnelly P.

Science. 2005 Oct 14;310(5746):321-4.

13.

Opinion: Re-evaluating prokaryotic species.

Gevers D, Cohan FM, Lawrence JG, Spratt BG, Coenye T, Feil EJ, Stackebrandt E, Van de Peer Y, Vandamme P, Thompson FL, Swings J.

Nat Rev Microbiol. 2005 Sep;3(9):733-9. Review.

PMID:
16138101
14.

Recombination shapes the natural population structure of the hyperthermophilic archaeon Sulfolobus islandicus.

Whitaker RJ, Grogan DW, Taylor JW.

Mol Biol Evol. 2005 Dec;22(12):2354-61. Epub 2005 Aug 10.

PMID:
16093568
15.

Neutral microepidemic evolution of bacterial pathogens.

Fraser C, Hanage WP, Spratt BG.

Proc Natl Acad Sci U S A. 2005 Feb 8;102(6):1968-73. Epub 2005 Jan 31.

16.

The influence of mutation, recombination, population history, and selection on patterns of genetic diversity in Neisseria meningitidis.

Jolley KA, Wilson DJ, Kriz P, McVean G, Maiden MC.

Mol Biol Evol. 2005 Mar;22(3):562-9. Epub 2004 Nov 10. Erratum in: Mol Biol Evol. 2005 Apr;22(4):1158.

PMID:
15537808
17.
18.

Community structure and metabolism through reconstruction of microbial genomes from the environment.

Tyson GW, Chapman J, Hugenholtz P, Allen EE, Ram RJ, Richardson PM, Solovyev VV, Rubin EM, Rokhsar DS, Banfield JF.

Nature. 2004 Mar 4;428(6978):37-43. Epub 2004 Feb 1.

PMID:
14961025
19.

Estimating recombination rates from population-genetic data.

Stumpf MP, McVean GA.

Nat Rev Genet. 2003 Dec;4(12):959-68. Review.

PMID:
14631356
20.

Consistency of estimators of the population-scaled recombination rate.

Fearnhead P.

Theor Popul Biol. 2003 Aug;64(1):67-79.

PMID:
12804872

Supplemental Content

Support Center