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AAA+ Ring and linker swing mechanism in the dynein motor.

Roberts AJ, Numata N, Walker ML, Kato YS, Malkova B, Kon T, Ohkura R, Arisaka F, Knight PJ, Sutoh K, Burgess SA.

Cell. 2009 Feb 6;136(3):485-95. doi: 10.1016/j.cell.2008.11.049.


Kinetic models for the coordinated stepping of cytoplasmic dynein.

Tsygankov D, Serohijos AW, Dokholyan NV, Elston TC.

J Chem Phys. 2009 Jan 14;130(2):025101. doi: 10.1063/1.3050098.


Structure and functional role of dynein's microtubule-binding domain.

Carter AP, Garbarino JE, Wilson-Kubalek EM, Shipley WE, Cho C, Milligan RA, Vale RD, Gibbons IR.

Science. 2008 Dec 12;322(5908):1691-5. doi: 10.1126/science.1164424.


Dynein pulls microtubules without rotating its stalk.

Ueno H, Yasunaga T, Shingyoji C, Hirose K.

Proc Natl Acad Sci U S A. 2008 Dec 16;105(50):19702-7. doi: 10.1073/pnas.0808194105. Epub 2008 Dec 8.


Intracellular transport and kinesin superfamily proteins, KIFs: structure, function, and dynamics.

Hirokawa N, Noda Y.

Physiol Rev. 2008 Jul;88(3):1089-118. doi: 10.1152/physrev.00023.2007. Review.


How subunit coupling produces the gamma-subunit rotary motion in F1-ATPase.

Pu J, Karplus M.

Proc Natl Acad Sci U S A. 2008 Jan 29;105(4):1192-7. doi: 10.1073/pnas.0708746105. Epub 2008 Jan 23.


Three-dimensional structure of cytoplasmic dynein bound to microtubules.

Mizuno N, Narita A, Kon T, Sutoh K, Kikkawa M.

Proc Natl Acad Sci U S A. 2007 Dec 26;104(52):20832-7. Epub 2007 Dec 19.


Force-induced bidirectional stepping of cytoplasmic dynein.

Gennerich A, Carter AP, Reck-Peterson SL, Vale RD.

Cell. 2007 Nov 30;131(5):952-65.


Mechanical control of the directional stepping dynamics of the kinesin motor.

Hyeon C, Onuchic JN.

Proc Natl Acad Sci U S A. 2007 Oct 30;104(44):17382-7. Epub 2007 Oct 24.


Internal strain regulates the nucleotide binding site of the kinesin leading head.

Hyeon C, Onuchic JN.

Proc Natl Acad Sci U S A. 2007 Feb 13;104(7):2175-80. Epub 2007 Feb 7.


Molecular motors: a theorist's perspective.

Kolomeisky AB, Fisher ME.

Annu Rev Phys Chem. 2007;58:675-95. Review.


Multiscale modeling of nucleosome dynamics.

Sharma S, Ding F, Dokholyan NV.

Biophys J. 2007 Mar 1;92(5):1457-70. Epub 2006 Dec 1.


A structural model reveals energy transduction in dynein.

Serohijos AW, Chen Y, Ding F, Elston TC, Dokholyan NV.

Proc Natl Acad Sci U S A. 2006 Dec 5;103(49):18540-5. Epub 2006 Nov 22.


Two modes of microtubule sliding driven by cytoplasmic dynein.

Shima T, Kon T, Imamula K, Ohkura R, Sutoh K.

Proc Natl Acad Sci U S A. 2006 Nov 21;103(47):17736-40. Epub 2006 Nov 3.


The molecular architecture of axonemes revealed by cryoelectron tomography.

Nicastro D, Schwartz C, Pierson J, Gaudette R, Porter ME, McIntosh JR.

Science. 2006 Aug 18;313(5789):944-8.


Insights into allosteric control of vinculin function from its large scale conformational dynamics.

Chen Y, Dokholyan NV.

J Biol Chem. 2006 Sep 29;281(39):29148-54. Epub 2006 Aug 6.


Single-molecule analysis of dynein processivity and stepping behavior.

Reck-Peterson SL, Yildiz A, Carter AP, Gennerich A, Zhang N, Vale RD.

Cell. 2006 Jul 28;126(2):335-48.


Processive bidirectional motion of dynein-dynactin complexes in vitro.

Ross JL, Wallace K, Shuman H, Goldman YE, Holzbaur EL.

Nat Cell Biol. 2006 Jun;8(6):562-70. Epub 2006 May 21.


Head-head coordination is required for the processive motion of cytoplasmic dynein, an AAA+ molecular motor.

Shima T, Imamula K, Kon T, Ohkura R, Sutoh K.

J Struct Biol. 2006 Oct;156(1):182-9. Epub 2006 Apr 21.


Overlapping hand-over-hand mechanism of single molecular motility of cytoplasmic dynein.

Toba S, Watanabe TM, Yamaguchi-Okimoto L, Toyoshima YY, Higuchi H.

Proc Natl Acad Sci U S A. 2006 Apr 11;103(15):5741-5. Epub 2006 Apr 3.

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