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Links from PubMed

Items: 11

1.

A bioinformatics pipeline for high-throughput microbial multilocus sequence typing (MLST) analyses.

Platt S, Pichon B, George R, Green J.

Clin Microbiol Infect. 2006 Nov;12(11):1144-6.

2.

mlstdbNet - distributed multi-locus sequence typing (MLST) databases.

Jolley KA, Chan MS, Maiden MC.

BMC Bioinformatics. 2004 Jul 1;5:86.

3.

Antigenic diversity of meningococcal enterobactin receptor FetA, a vaccine component.

Thompson EA, Feavers IM, Maiden MC.

Microbiology. 2003 Jul;149(Pt 7):1849-58.

PMID:
12855736
4.

Automated finishing with autofinish.

Gordon D, Desmarais C, Green P.

Genome Res. 2001 Apr;11(4):614-25.

5.

Diversity and prevalence of PorA types in Neisseria meningitidis serogroup B in the United States, 1992-1998.

Sacchi CT, Whitney AM, Popovic T, Beall DS, Reeves MW, Plikaytis BD, Rosenstein NE, Perkins BA, Tondella ML, Mayer LW.

J Infect Dis. 2000 Oct;182(4):1169-76. Epub 2000 Sep 8.

PMID:
10979914
6.

Multilocus sequence typing.

Enright MC, Spratt BG.

Trends Microbiol. 1999 Dec;7(12):482-7. Review.

PMID:
10603483
7.

Correlation between serological and sequencing analyses of the PorB outer membrane protein in the Neisseria meningitidis serotyping system.

Sacchi CT, Lemos AP, Whitney AM, Solari CA, Brandt ME, Melles CE, Frasch CE, Mayer LW.

Clin Diagn Lab Immunol. 1998 May;5(3):348-54.

8.
9.

Base-calling of automated sequencer traces using phred. I. Accuracy assessment.

Ewing B, Hillier L, Wendl MC, Green P.

Genome Res. 1998 Mar;8(3):175-85.

10.

Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms.

Maiden MC, Bygraves JA, Feil E, Morelli G, Russell JE, Urwin R, Zhang Q, Zhou J, Zurth K, Caugant DA, Feavers IM, Achtman M, Spratt BG.

Proc Natl Acad Sci U S A. 1998 Mar 17;95(6):3140-5.

11.

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ.

Nucleic Acids Res. 1997 Sep 1;25(17):3389-402. Review.

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