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Items: 20

1.

hapConstructor: automatic construction and testing of haplotypes in a Monte Carlo framework.

Abo R, Knight S, Wong J, Cox A, Camp NJ.

Bioinformatics. 2008 Sep 15;24(18):2105-7. doi: 10.1093/bioinformatics/btn359. Epub 2008 Jul 23.

2.

Caspase-8: fly or die.

Frisch SM.

Cancer Res. 2008 Jun 15;68(12):4491-3. doi: 10.1158/0008-5472.CAN-08-0952. Review.

3.

The common D302H variant of CASP8 is associated with risk of glioma.

Bethke L, Sullivan K, Webb E, Murray A, Schoemaker M, Auvinen A, Kiuru A, Salminen T, Johansen C, Christensen HC, Muir K, McKinney P, Hepworth S, Dimitropoulou P, Lophatananon A, Feychting M, Lönn S, Ahlbom A, Malmer B, Henriksson R, Swerdlow A, Houlston R.

Cancer Epidemiol Biomarkers Prev. 2008 Apr;17(4):987-9. doi: 10.1158/1055-9965.EPI-07-2807.

4.

A promoter polymorphism in the CASP8 gene is not associated with cancer risk.

Haiman CA, Garcia RR, Kolonel LN, Henderson BE, Wu AH, Le Marchand L.

Nat Genet. 2008 Mar;40(3):259-60; author reply 260-1. doi: 10.1038/ng0308-259. No abstract available.

PMID:
18305469
5.

PedGenie: meta genetic association testing in mixed family and case-control designs.

Curtin K, Wong J, Allen-Brady K, Camp NJ.

BMC Bioinformatics. 2007 Nov 15;8:448.

6.

The CASP8 -652 6N del promoter polymorphism and breast cancer risk: a multicenter study.

Frank B, Rigas SH, Bermejo JL, Wiestler M, Wagner K, Hemminki K, Reed MW, Sutter C, Wappenschmidt B, Balasubramanian SP, Meindl A, Kiechle M, Bugert P, Schmutzler RK, Bartram CR, Justenhoven C, Ko YD, Brüning T, Brauch H, Hamann U, Pharoah PP, Dunning AM, Pooley KA, Easton DF, Cox A, Burwinkel B.

Breast Cancer Res Treat. 2008 Sep;111(1):139-44. Epub 2007 Sep 21.

PMID:
17891485
7.

Common variants on chromosomes 2q35 and 16q12 confer susceptibility to estrogen receptor-positive breast cancer.

Stacey SN, Manolescu A, Sulem P, Rafnar T, Gudmundsson J, Gudjonsson SA, Masson G, Jakobsdottir M, Thorlacius S, Helgason A, Aben KK, Strobbe LJ, Albers-Akkers MT, Swinkels DW, Henderson BE, Kolonel LN, Le Marchand L, Millastre E, Andres R, Godino J, Garcia-Prats MD, Polo E, Tres A, Mouy M, Saemundsdottir J, Backman VM, Gudmundsson L, Kristjansson K, Bergthorsson JT, Kostic J, Frigge ML, Geller F, Gudbjartsson D, Sigurdsson H, Jonsdottir T, Hrafnkelsson J, Johannsson J, Sveinsson T, Myrdal G, Grimsson HN, Jonsson T, von Holst S, Werelius B, Margolin S, Lindblom A, Mayordomo JI, Haiman CA, Kiemeney LA, Johannsson OT, Gulcher JR, Thorsteinsdottir U, Kong A, Stefansson K.

Nat Genet. 2007 Jul;39(7):865-9. Epub 2007 May 27.

PMID:
17529974
8.

A genome-wide association study identifies alleles in FGFR2 associated with risk of sporadic postmenopausal breast cancer.

Hunter DJ, Kraft P, Jacobs KB, Cox DG, Yeager M, Hankinson SE, Wacholder S, Wang Z, Welch R, Hutchinson A, Wang J, Yu K, Chatterjee N, Orr N, Willett WC, Colditz GA, Ziegler RG, Berg CD, Buys SS, McCarty CA, Feigelson HS, Calle EE, Thun MJ, Hayes RB, Tucker M, Gerhard DS, Fraumeni JF Jr, Hoover RN, Thomas G, Chanock SJ.

Nat Genet. 2007 Jul;39(7):870-4. Epub 2007 May 27.

9.

Genome-wide association study identifies novel breast cancer susceptibility loci.

Easton DF, Pooley KA, Dunning AM, Pharoah PD, Thompson D, Ballinger DG, Struewing JP, Morrison J, Field H, Luben R, Wareham N, Ahmed S, Healey CS, Bowman R; SEARCH collaborators, Meyer KB, Haiman CA, Kolonel LK, Henderson BE, Le Marchand L, Brennan P, Sangrajrang S, Gaborieau V, Odefrey F, Shen CY, Wu PE, Wang HC, Eccles D, Evans DG, Peto J, Fletcher O, Johnson N, Seal S, Stratton MR, Rahman N, Chenevix-Trench G, Bojesen SE, Nordestgaard BG, Axelsson CK, Garcia-Closas M, Brinton L, Chanock S, Lissowska J, Peplonska B, Nevanlinna H, Fagerholm R, Eerola H, Kang D, Yoo KY, Noh DY, Ahn SH, Hunter DJ, Hankinson SE, Cox DG, Hall P, Wedren S, Liu J, Low YL, Bogdanova N, Schürmann P, Dörk T, Tollenaar RA, Jacobi CE, Devilee P, Klijn JG, Sigurdson AJ, Doody MM, Alexander BH, Zhang J, Cox A, Brock IW, MacPherson G, Reed MW, Couch FJ, Goode EL, Olson JE, Meijers-Heijboer H, van den Ouweland A, Uitterlinden A, Rivadeneira F, Milne RL, Ribas G, Gonzalez-Neira A, Benitez J, Hopper JL, McCredie M, Southey M, Giles GG, Schroen C, Justenhoven C, Brauch H, Hamann U, Ko YD, Spurdle AB, Beesley J, Chen X; kConFab; AOCS Management Group, Mannermaa A, Kosma VM, Kataja V, Hartikainen J, Day NE, Cox DR, Ponder BA.

Nature. 2007 Jun 28;447(7148):1087-93.

10.

A six-nucleotide insertion-deletion polymorphism in the CASP8 promoter is associated with susceptibility to multiple cancers.

Sun T, Gao Y, Tan W, Ma S, Shi Y, Yao J, Guo Y, Yang M, Zhang X, Zhang Q, Zeng C, Lin D.

Nat Genet. 2007 May;39(5):605-13. Epub 2007 Apr 22.

PMID:
17450141
11.

A common coding variant in CASP8 is associated with breast cancer risk.

Cox A, Dunning AM, Garcia-Closas M, Balasubramanian S, Reed MW, Pooley KA, Scollen S, Baynes C, Ponder BA, Chanock S, Lissowska J, Brinton L, Peplonska B, Southey MC, Hopper JL, McCredie MR, Giles GG, Fletcher O, Johnson N, dos Santos Silva I, Gibson L, Bojesen SE, Nordestgaard BG, Axelsson CK, Torres D, Hamann U, Justenhoven C, Brauch H, Chang-Claude J, Kropp S, Risch A, Wang-Gohrke S, Schürmann P, Bogdanova N, Dörk T, Fagerholm R, Aaltonen K, Blomqvist C, Nevanlinna H, Seal S, Renwick A, Stratton MR, Rahman N, Sangrajrang S, Hughes D, Odefrey F, Brennan P, Spurdle AB, Chenevix-Trench G; Kathleen Cunningham Foundation Consortium for Research into Familial Breast Cancer, Beesley J, Mannermaa A, Hartikainen J, Kataja V, Kosma VM, Couch FJ, Olson JE, Goode EL, Broeks A, Schmidt MK, Hogervorst FB, Van't Veer LJ, Kang D, Yoo KY, Noh DY, Ahn SH, Wedrén S, Hall P, Low YL, Liu J, Milne RL, Ribas G, Gonzalez-Neira A, Benitez J, Sigurdson AJ, Stredrick DL, Alexander BH, Struewing JP, Pharoah PD, Easton DF; Breast Cancer Association Consortium.

Nat Genet. 2007 Mar;39(3):352-8. Epub 2007 Feb 11. Erratum in: Nat Genet. 2007 May;39(5):688.

PMID:
17293864
12.
13.

Src kinase phosphorylates Caspase-8 on Tyr380: a novel mechanism of apoptosis suppression.

Cursi S, Rufini A, Stagni V, Condò I, Matafora V, Bachi A, Bonifazi AP, Coppola L, Superti-Furga G, Testi R, Barilà D.

EMBO J. 2006 May 3;25(9):1895-905. Epub 2006 Apr 13.

14.

Efficiency and power in genetic association studies.

de Bakker PI, Yelensky R, Pe'er I, Gabriel SB, Daly MJ, Altshuler D.

Nat Genet. 2005 Nov;37(11):1217-23. Epub 2005 Oct 23.

PMID:
16244653
15.

Re: Association of a common variant of the CASP8 gene with reduced risk of breast cancer.

Frank B, Bermejo JL, Hemminki K, Klaes R, Bugert P, Wappenschmidt B, Schmutzler RK, Burwinkel B.

J Natl Cancer Inst. 2005 Jul 6;97(13):1012; author reply 1012-3. No abstract available.

PMID:
15998955
16.

Association of a common variant of the CASP8 gene with reduced risk of breast cancer.

MacPherson G, Healey CS, Teare MD, Balasubramanian SP, Reed MW, Pharoah PD, Ponder BA, Meuth M, Bhattacharyya NP, Cox A.

J Natl Cancer Inst. 2004 Dec 15;96(24):1866-9.

PMID:
15601643
17.

Haploview: analysis and visualization of LD and haplotype maps.

Barrett JC, Fry B, Maller J, Daly MJ.

Bioinformatics. 2005 Jan 15;21(2):263-5. Epub 2004 Aug 5.

PMID:
15297300
18.
19.

A potential role for the XRCC2 R188H polymorphic site in DNA-damage repair and breast cancer.

Rafii S, O'Regan P, Xinarianos G, Azmy I, Stephenson T, Reed M, Meuth M, Thacker J, Cox A.

Hum Mol Genet. 2002 Jun 1;11(12):1433-8.

PMID:
12023985
20.

Familiality of cancer in Utah.

Cannon-Albright LA, Thomas A, Goldgar DE, Gholami K, Rowe K, Jacobsen M, McWhorter WP, Skolnick MH.

Cancer Res. 1994 May 1;54(9):2378-85.

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