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Items: 1 to 20 of 86


Directing experimental biology: a case study in mitochondrial biogenesis.

Hibbs MA, Myers CL, Huttenhower C, Hess DC, Li K, Caudy AA, Troyanskaya OG.

PLoS Comput Biol. 2009 Mar;5(3):e1000322. doi: 10.1371/journal.pcbi.1000322. Epub 2009 Mar 20.


Predicting gene function in a hierarchical context with an ensemble of classifiers.

Guan Y, Myers CL, Hess DC, Barutcuoglu Z, Caudy AA, Troyanskaya OG.

Genome Biol. 2008;9 Suppl 1:S3. doi: 10.1186/gb-2008-9-s1-s3. Epub 2008 Jun 27.


A critical assessment of Mus musculus gene function prediction using integrated genomic evidence.

Peña-Castillo L, Tasan M, Myers CL, Lee H, Joshi T, Zhang C, Guan Y, Leone M, Pagnani A, Kim WK, Krumpelman C, Tian W, Obozinski G, Qi Y, Mostafavi S, Lin GN, Berriz GF, Gibbons FD, Lanckriet G, Qiu J, Grant C, Barutcuoglu Z, Hill DP, Warde-Farley D, Grouios C, Ray D, Blake JA, Deng M, Jordan MI, Noble WS, Morris Q, Klein-Seetharaman J, Bar-Joseph Z, Chen T, Sun F, Troyanskaya OG, Marcotte EM, Xu D, Hughes TR, Roth FP.

Genome Biol. 2008;9 Suppl 1:S2. doi: 10.1186/gb-2008-9-s1-s2. Epub 2008 Jun 27.


The membrane-bound GTPase Guf1 promotes mitochondrial protein synthesis under suboptimal conditions.

Bauerschmitt H, Funes S, Herrmann JM.

J Biol Chem. 2008 Jun 20;283(25):17139-46. doi: 10.1074/jbc.M710037200. Epub 2008 Apr 28.


Yeast as a model for human disease.

Smith MG, Snyder M.

Curr Protoc Hum Genet. 2006 Feb;Chapter 15:Unit 15.6. doi: 10.1002/0471142905.hg1506s48. Review.


Distinct acto/myosin-I structures associate with endocytic profiles at the plasma membrane.

Idrissi FZ, Grötsch H, Fernández-Golbano IM, Presciatto-Baschong C, Riezman H, Geli MI.

J Cell Biol. 2008 Mar 24;180(6):1219-32. doi: 10.1083/jcb.200708060. Epub 2008 Mar 17.


Multiple pathways regulate endocytic coat disassembly in Saccharomyces cerevisiae for optimal downstream trafficking.

Toret CP, Lee L, Sekiya-Kawasaki M, Drubin DG.

Traffic. 2008 May;9(5):848-59. doi: 10.1111/j.1600-0854.2008.00726.x. Epub 2008 Feb 22.


A mouse model of mitochondrial disease reveals germline selection against severe mtDNA mutations.

Fan W, Waymire KG, Narula N, Li P, Rocher C, Coskun PE, Vannan MA, Narula J, Macgregor GR, Wallace DC.

Science. 2008 Feb 15;319(5865):958-62. doi: 10.1126/science.1147786.


ATP25, a new nuclear gene of Saccharomyces cerevisiae required for expression and assembly of the Atp9p subunit of mitochondrial ATPase.

Zeng X, Barros MH, Shulman T, Tzagoloff A.

Mol Biol Cell. 2008 Apr;19(4):1366-77. doi: 10.1091/mbc.E07-08-0746. Epub 2008 Jan 23.


Mitochondrial Iba57p is required for Fe/S cluster formation on aconitase and activation of radical SAM enzymes.

Gelling C, Dawes IW, Richhardt N, Lill R, Mühlenhoff U.

Mol Cell Biol. 2008 Mar;28(5):1851-61. Epub 2007 Dec 17.


Systematic screens for human disease genes, from yeast to human and back.

Perocchi F, Mancera E, Steinmetz LM.

Mol Biosyst. 2008 Jan;4(1):18-29. Epub 2007 Sep 25. Review.


Coa1 links the Mss51 post-translational function to Cox1 cofactor insertion in cytochrome c oxidase assembly.

Pierrel F, Bestwick ML, Cobine PA, Khalimonchuk O, Cricco JA, Winge DR.

EMBO J. 2007 Oct 17;26(20):4335-46. Epub 2007 Sep 20.


Shy1 couples Cox1 translational regulation to cytochrome c oxidase assembly.

Mick DU, Wagner K, van der Laan M, Frazier AE, Perschil I, Pawlas M, Meyer HE, Warscheid B, Rehling P.

EMBO J. 2007 Oct 17;26(20):4347-58. Epub 2007 Sep 20.


Mitochondria on the move.

Boldogh IR, Pon LA.

Trends Cell Biol. 2007 Oct;17(10):502-10. Epub 2007 Sep 4. Review.


Exploring the functional landscape of gene expression: directed search of large microarray compendia.

Hibbs MA, Hess DC, Myers CL, Huttenhower C, Li K, Troyanskaya OG.

Bioinformatics. 2007 Oct 15;23(20):2692-9. Epub 2007 Aug 27.


Research on mitochondria and aging, 2006-2007.

Lambert AJ, Brand MD.

Aging Cell. 2007 Aug;6(4):417-20. Review.


Context-sensitive data integration and prediction of biological networks.

Myers CL, Troyanskaya OG.

Bioinformatics. 2007 Sep 1;23(17):2322-30. Epub 2007 Jun 28.


Visualization of mitochondria in budding yeast.

Swayne TC, Gay AC, Pon LA.

Methods Cell Biol. 2007;80:591-626. Review. No abstract available.


Why are there still over 1000 uncharacterized yeast genes?

Peña-Castillo L, Hughes TR.

Genetics. 2007 May;176(1):7-14. Epub 2007 Apr 15. Review.

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