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Items: 1 to 20 of 172

1.

The RNA acetyltransferase driven by ATP hydrolysis synthesizes N4-acetylcytidine of tRNA anticodon.

Ikeuchi Y, Kitahara K, Suzuki T.

EMBO J. 2008 Aug 20;27(16):2194-203. doi: 10.1038/emboj.2008.154. Epub 2008 Jul 31.

2.

Structure, dynamics, and function of RNA modification enzymes.

Ishitani R, Yokoyama S, Nureki O.

Curr Opin Struct Biol. 2008 Jun;18(3):330-9. doi: 10.1016/j.sbi.2008.05.003. Epub 2008 Jun 5. Review.

PMID:
18539024
3.

Dynamic guide-target interactions contribute to sequential 2'-O-methylation by a unique archaeal dual guide box C/D sRNP.

Singh SK, Gurha P, Gupta R.

RNA. 2008 Jul;14(7):1411-23. doi: 10.1261/rna.1003308. Epub 2008 May 30.

4.

A conserved rRNA methyltransferase regulates ribosome biogenesis.

Xu Z, O'Farrell HC, Rife JP, Culver GM.

Nat Struct Mol Biol. 2008 May;15(5):534-6. doi: 10.1038/nsmb.1408. Epub 2008 Apr 6.

PMID:
18391965
5.

The conserved Wobble uridine tRNA thiolase Ctu1-Ctu2 is required to maintain genome integrity.

Dewez M, Bauer F, Dieu M, Raes M, Vandenhaute J, Hermand D.

Proc Natl Acad Sci U S A. 2008 Apr 8;105(14):5459-64. doi: 10.1073/pnas.0709404105. Epub 2008 Apr 7.

6.

tRNA's modifications bring order to gene expression.

Gustilo EM, Vendeix FA, Agris PF.

Curr Opin Microbiol. 2008 Apr;11(2):134-40. doi: 10.1016/j.mib.2008.02.003. Epub 2008 Apr 2. Review.

7.

Maturation of the 5S rRNA 5' end is catalyzed in vitro by the endonuclease tRNase Z in the archaeon H. volcanii.

Hölzle A, Fischer S, Heyer R, Schütz S, Zacharias M, Walther P, Allers T, Marchfelder A.

RNA. 2008 May;14(5):928-37. doi: 10.1261/rna.933208. Epub 2008 Mar 27.

8.

Combined in silico and experimental identification of the Pyrococcus abyssi H/ACA sRNAs and their target sites in ribosomal RNAs.

Muller S, Leclerc F, Behm-Ansmant I, Fourmann JB, Charpentier B, Branlant C.

Nucleic Acids Res. 2008 May;36(8):2459-75. doi: 10.1093/nar/gkn077. Epub 2008 Feb 27.

9.

Role of 16S ribosomal RNA methylations in translation initiation in Escherichia coli.

Das G, Thotala DK, Kapoor S, Karunanithi S, Thakur SS, Singh NS, Varshney U.

EMBO J. 2008 Mar 19;27(6):840-51. doi: 10.1038/emboj.2008.20. Epub 2008 Feb 21.

10.

pH-dependent structural changes of helix 69 from Escherichia coli 23S ribosomal RNA.

Abeysirigunawardena SC, Chow CS.

RNA. 2008 Apr;14(4):782-92. doi: 10.1261/rna.779908. Epub 2008 Feb 11.

11.

Functional importance of individual rRNA 2'-O-ribose methylations revealed by high-resolution phenotyping.

Esguerra J, Warringer J, Blomberg A.

RNA. 2008 Apr;14(4):649-56. doi: 10.1261/rna.845808. Epub 2008 Feb 6.

12.

Structural Insights into ribosome recycling factor interactions with the 70S ribosome.

Pai RD, Zhang W, Schuwirth BS, Hirokawa G, Kaji H, Kaji A, Cate JH.

J Mol Biol. 2008 Mar 7;376(5):1334-47. doi: 10.1016/j.jmb.2007.12.048. Epub 2008 Jan 3.

13.

Identification and role of functionally important motifs in the 970 loop of Escherichia coli 16S ribosomal RNA.

Saraiya AA, Lamichhane TN, Chow CS, SantaLucia J Jr, Cunningham PR.

J Mol Biol. 2008 Feb 22;376(3):645-57. doi: 10.1016/j.jmb.2007.11.102. Epub 2007 Dec 7.

14.
15.

Acquisition of a bacterial RumA-type tRNA(uracil-54, C5)-methyltransferase by Archaea through an ancient horizontal gene transfer.

Urbonavicius J, Auxilien S, Walbott H, Trachana K, Golinelli-Pimpaneau B, Brochier-Armanet C, Grosjean H.

Mol Microbiol. 2008 Jan;67(2):323-35. Epub 2007 Dec 7.

16.

Pseudouridylation of helix 69 of 23S rRNA is necessary for an effective translation termination.

Ejby M, Sørensen MA, Pedersen S.

Proc Natl Acad Sci U S A. 2007 Dec 4;104(49):19410-5. Epub 2007 Nov 21.

17.

Identification and characterization of a tRNA decoding the rare AUA codon in Haloarcula marismortui.

Köhrer C, Srinivasan G, Mandal D, Mallick B, Ghosh Z, Chakrabarti J, Rajbhandary UL.

RNA. 2008 Jan;14(1):117-26. Epub 2007 Nov 12.

18.

Differential roles of archaeal box H/ACA proteins in guide RNA-dependent and independent pseudouridine formation.

Gurha P, Joardar A, Chaurasia P, Gupta R.

RNA Biol. 2007 Oct;4(2):101-9. Epub 2007 Oct 16.

PMID:
17993784
19.

The 3D rRNA modification maps database: with interactive tools for ribosome analysis.

Piekna-Przybylska D, Decatur WA, Fournier MJ.

Nucleic Acids Res. 2008 Jan;36(Database issue):D178-83. Epub 2007 Oct 18.

20.

The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions.

Markowitz VM, Szeto E, Palaniappan K, Grechkin Y, Chu K, Chen IM, Dubchak I, Anderson I, Lykidis A, Mavromatis K, Ivanova NN, Kyrpides NC.

Nucleic Acids Res. 2008 Jan;36(Database issue):D528-33. Epub 2007 Oct 12.

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