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Items: 1 to 20 of 29

1.

HIP2: an online database of human plasma proteins from healthy individuals.

Saha S, Harrison SH, Shen C, Tang H, Radivojac P, Arnold RJ, Zhang X, Chen JY.

BMC Med Genomics. 2008 Apr 25;1:12. doi: 10.1186/1755-8794-1-12.

2.

DrugBank: a knowledgebase for drugs, drug actions and drug targets.

Wishart DS, Knox C, Guo AC, Cheng D, Shrivastava S, Tzur D, Gautam B, Hassanali M.

Nucleic Acids Res. 2008 Jan;36(Database issue):D901-6. Epub 2007 Nov 29.

3.

Network modeling links breast cancer susceptibility and centrosome dysfunction.

Pujana MA, Han JD, Starita LM, Stevens KN, Tewari M, Ahn JS, Rennert G, Moreno V, Kirchhoff T, Gold B, Assmann V, Elshamy WM, Rual JF, Levine D, Rozek LS, Gelman RS, Gunsalus KC, Greenberg RA, Sobhian B, Bertin N, Venkatesan K, Ayivi-Guedehoussou N, Solé X, Hernández P, Lázaro C, Nathanson KL, Weber BL, Cusick ME, Hill DE, Offit K, Livingston DM, Gruber SB, Parvin JD, Vidal M.

Nat Genet. 2007 Nov;39(11):1338-49. Epub 2007 Oct 7.

PMID:
17922014
4.

Drug-target network.

Yildirim MA, Goh KI, Cusick ME, Barabási AL, Vidal M.

Nat Biotechnol. 2007 Oct;25(10):1119-26.

PMID:
17921997
5.

Network pharmacology.

Hopkins AL.

Nat Biotechnol. 2007 Oct;25(10):1110-1. No abstract available.

PMID:
17921993
6.
7.

Tools for visually exploring biological networks.

Suderman M, Hallett M.

Bioinformatics. 2007 Oct 15;23(20):2651-9. Epub 2007 Aug 25. Review.

PMID:
17720984
8.

The human disease network.

Goh KI, Cusick ME, Valle D, Childs B, Vidal M, Barabási AL.

Proc Natl Acad Sci U S A. 2007 May 22;104(21):8685-90. Epub 2007 May 14.

9.

UniHI: an entry gate to the human protein interactome.

Chaurasia G, Iqbal Y, Hänig C, Herzel H, Wanker EE, Futschik ME.

Nucleic Acids Res. 2007 Jan;35(Database issue):D590-4. Epub 2006 Dec 7.

10.
11.

Mining Alzheimer disease relevant proteins from integrated protein interactome data.

Chen JY, Shen C, Sivachenko AY.

Pac Symp Biocomput. 2006:367-78.

12.

BiologicalNetworks: visualization and analysis tool for systems biology.

Baitaluk M, Sedova M, Ray A, Gupta A.

Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W466-71.

13.

VisANT: data-integrating visual framework for biological networks and modules.

Hu Z, Mellor J, Wu J, Yamada T, Holloway D, Delisi C.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W352-7.

14.

Data mining in protein interactomics. Six computational research challenges and opportunities.

Chen JY, Sivachenko AY.

IEEE Eng Med Biol Mag. 2005 May-Jun;24(3):95-102. No abstract available.

PMID:
15971847
15.

Correlation between gene expression profiles and protein-protein interactions within and across genomes.

Bhardwaj N, Lu H.

Bioinformatics. 2005 Jun 1;21(11):2730-8. Epub 2005 Mar 29.

PMID:
15797912
16.

Online predicted human interaction database.

Brown KR, Jurisica I.

Bioinformatics. 2005 May 1;21(9):2076-82. Epub 2005 Jan 18.

PMID:
15657099
17.

Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders.

Hamosh A, Scott AF, Amberger JS, Bocchini CA, McKusick VA.

Nucleic Acids Res. 2005 Jan 1;33(Database issue):D514-7.

18.

STRING: known and predicted protein-protein associations, integrated and transferred across organisms.

von Mering C, Jensen LJ, Snel B, Hooper SD, Krupp M, Foglierini M, Jouffre N, Huynen MA, Bork P.

Nucleic Acids Res. 2005 Jan 1;33(Database issue):D433-7.

19.

WebInterViewer: visualizing and analyzing molecular interaction networks.

Han K, Ju BH, Jung H.

Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W89-95.

20.

Cytoscape: a software environment for integrated models of biomolecular interaction networks.

Shannon P, Markiel A, Ozier O, Baliga NS, Wang JT, Ramage D, Amin N, Schwikowski B, Ideker T.

Genome Res. 2003 Nov;13(11):2498-504.

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