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Items: 1 to 20 of 51

1.

Functionally distinct regulatory RNAs generated by bidirectional transcription and processing of microRNA loci.

Tyler DM, Okamura K, Chung WJ, Hagen JW, Berezikov E, Hannon GJ, Lai EC.

Genes Dev. 2008 Jan 1;22(1):26-36. doi: 10.1101/gad.1615208.

2.

MicroRNAs in the Drosophila bithorax complex.

Bender W.

Genes Dev. 2008 Jan 1;22(1):14-9. doi: 10.1101/gad.1614208.

3.

A single Hox locus in Drosophila produces functional microRNAs from opposite DNA strands.

Stark A, Bushati N, Jan CH, Kheradpour P, Hodges E, Brennecke J, Bartel DP, Cohen SM, Kellis M.

Genes Dev. 2008 Jan 1;22(1):8-13. doi: 10.1101/gad.1613108.

4.

Identifications of conserved 7-mers in 3'-UTRs and microRNAs in Drosophila.

Gu J, Fu H, Zhang X, Li Y.

BMC Bioinformatics. 2007 Nov 8;8:432.

5.

Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures.

Stark A, Lin MF, Kheradpour P, Pedersen JS, Parts L, Carlson JW, Crosby MA, Rasmussen MD, Roy S, Deoras AN, Ruby JG, Brennecke J; Harvard FlyBase curators; Berkeley Drosophila Genome Project, Hodges E, Hinrichs AS, Caspi A, Paten B, Park SW, Han MV, Maeder ML, Polansky BJ, Robson BE, Aerts S, van Helden J, Hassan B, Gilbert DG, Eastman DA, Rice M, Weir M, Hahn MW, Park Y, Dewey CN, Pachter L, Kent WJ, Haussler D, Lai EC, Bartel DP, Hannon GJ, Kaufman TC, Eisen MB, Clark AG, Smith D, Celniker SE, Gelbart WM, Kellis M.

Nature. 2007 Nov 8;450(7167):219-32.

6.

Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes.

Stark A, Kheradpour P, Parts L, Brennecke J, Hodges E, Hannon GJ, Kellis M.

Genome Res. 2007 Dec;17(12):1865-79. Epub 2007 Nov 7.

7.

Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs.

Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC.

Genome Res. 2007 Dec;17(12):1850-64. Epub 2007 Nov 7.

8.

Functional screening identifies miR-315 as a potent activator of Wingless signaling.

Silver SJ, Hagen JW, Okamura K, Perrimon N, Lai EC.

Proc Natl Acad Sci U S A. 2007 Nov 13;104(46):18151-6. Epub 2007 Nov 7.

9.

Mammalian mirtron genes.

Berezikov E, Chung WJ, Willis J, Cuppen E, Lai EC.

Mol Cell. 2007 Oct 26;28(2):328-36.

10.

Determinants of targeting by endogenous and exogenous microRNAs and siRNAs.

Nielsen CB, Shomron N, Sandberg R, Hornstein E, Kitzman J, Burge CB.

RNA. 2007 Nov;13(11):1894-910. Epub 2007 Sep 13.

11.

Sorting of Drosophila small silencing RNAs.

Tomari Y, Du T, Zamore PD.

Cell. 2007 Jul 27;130(2):299-308.

12.

Drosophila microRNAs are sorted into functionally distinct argonaute complexes after production by dicer-1.

Förstemann K, Horwich MD, Wee L, Tomari Y, Zamore PD.

Cell. 2007 Jul 27;130(2):287-97.

13.

MicroRNA targeting specificity in mammals: determinants beyond seed pairing.

Grimson A, Farh KK, Johnston WK, Garrett-Engele P, Lim LP, Bartel DP.

Mol Cell. 2007 Jul 6;27(1):91-105.

14.

The mirtron pathway generates microRNA-class regulatory RNAs in Drosophila.

Okamura K, Hagen JW, Duan H, Tyler DM, Lai EC.

Cell. 2007 Jul 13;130(1):89-100. Epub 2007 Jun 28.

15.

Intronic microRNA precursors that bypass Drosha processing.

Ruby JG, Jan CH, Bartel DP.

Nature. 2007 Jul 5;448(7149):83-6. Epub 2007 Jun 24.

16.

Spatial preferences of microRNA targets in 3' untranslated regions.

Majoros WH, Ohler U.

BMC Genomics. 2007 Jun 7;8:152.

17.

microRNA functions.

Bushati N, Cohen SM.

Annu Rev Cell Dev Biol. 2007;23:175-205. Review.

PMID:
17506695
18.

Inference of miRNA targets using evolutionary conservation and pathway analysis.

Gaidatzis D, van Nimwegen E, Hausser J, Zavolan M.

BMC Bioinformatics. 2007 Mar 1;8:69. Erratum in: BMC Bioinformatics. 2007 Jul 12;8(1):248.

19.

Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans.

Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP.

Cell. 2006 Dec 15;127(6):1193-207.

20.

Cloning and expression of new microRNAs from zebrafish.

Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH.

Nucleic Acids Res. 2006 May 12;34(9):2558-69. Print 2006.

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