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Items: 1 to 20 of 40

1.

Developmental regulation of gene expression in trypanosomatid parasitic protozoa.

Haile S, Papadopoulou B.

Curr Opin Microbiol. 2007 Dec;10(6):569-77. doi: 10.1016/j.mib.2007.10.001. Review.

PMID:
18177626
2.

Members of a large retroposon family are determinants of post-transcriptional gene expression in Leishmania.

Bringaud F, Müller M, Cerqueira GC, Smith M, Rochette A, El-Sayed NM, Papadopoulou B, Ghedin E.

PLoS Pathog. 2007 Sep 7;3(9):1291-307.

3.
4.

RNA structure: bioinformatic analysis.

Jossinet F, Ludwig TE, Westhof E.

Curr Opin Microbiol. 2007 Jun;10(3):279-85. Epub 2007 Jun 4. Review.

PMID:
17548241
5.

Bridging the gap in RNA structure prediction.

Shapiro BA, Yingling YG, Kasprzak W, Bindewald E.

Curr Opin Struct Biol. 2007 Apr;17(2):157-65. Epub 2007 Mar 23. Review.

PMID:
17383172
6.

mRNA maturation by two-step trans-splicing/polyadenylation processing in trypanosomes.

Jäger AV, De Gaudenzi JG, Cassola A, D'Orso I, Frasch AC.

Proc Natl Acad Sci U S A. 2007 Feb 13;104(7):2035-42. Epub 2007 Jan 31.

7.

MEME: discovering and analyzing DNA and protein sequence motifs.

Bailey TL, Williams N, Misleh C, Li WW.

Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W369-73.

8.

The tree of eukaryotes.

Keeling PJ, Burger G, Durnford DG, Lang BF, Lee RW, Pearlman RE, Roger AJ, Gray MW.

Trends Ecol Evol. 2005 Dec;20(12):670-6. Epub 2005 Oct 10.

PMID:
16701456
9.

A computational investigation of kinetoplastid trans-splicing.

Gopal S, Awadalla S, Gaasterland T, Cross GA.

Genome Biol. 2005;6(11):R95. Epub 2005 Oct 17.

10.

Advances in leishmaniasis.

Murray HW, Berman JD, Davies CR, Saravia NG.

Lancet. 2005 Oct 29-Nov 4;366(9496):1561-77. Review.

PMID:
16257344
11.

The genome of the kinetoplastid parasite, Leishmania major.

Ivens AC, Peacock CS, Worthey EA, Murphy L, Aggarwal G, Berriman M, Sisk E, Rajandream MA, Adlem E, Aert R, Anupama A, Apostolou Z, Attipoe P, Bason N, Bauser C, Beck A, Beverley SM, Bianchettin G, Borzym K, Bothe G, Bruschi CV, Collins M, Cadag E, Ciarloni L, Clayton C, Coulson RM, Cronin A, Cruz AK, Davies RM, De Gaudenzi J, Dobson DE, Duesterhoeft A, Fazelina G, Fosker N, Frasch AC, Fraser A, Fuchs M, Gabel C, Goble A, Goffeau A, Harris D, Hertz-Fowler C, Hilbert H, Horn D, Huang Y, Klages S, Knights A, Kube M, Larke N, Litvin L, Lord A, Louie T, Marra M, Masuy D, Matthews K, Michaeli S, Mottram JC, Müller-Auer S, Munden H, Nelson S, Norbertczak H, Oliver K, O'neil S, Pentony M, Pohl TM, Price C, Purnelle B, Quail MA, Rabbinowitsch E, Reinhardt R, Rieger M, Rinta J, Robben J, Robertson L, Ruiz JC, Rutter S, Saunders D, Schäfer M, Schein J, Schwartz DC, Seeger K, Seyler A, Sharp S, Shin H, Sivam D, Squares R, Squares S, Tosato V, Vogt C, Volckaert G, Wambutt R, Warren T, Wedler H, Woodward J, Zhou S, Zimmermann W, Smith DF, Blackwell JM, Stuart KD, Barrell B, Myler PJ.

Science. 2005 Jul 15;309(5733):436-42.

12.

Comparative genomics of trypanosomatid parasitic protozoa.

El-Sayed NM, Myler PJ, Blandin G, Berriman M, Crabtree J, Aggarwal G, Caler E, Renauld H, Worthey EA, Hertz-Fowler C, Ghedin E, Peacock C, Bartholomeu DC, Haas BJ, Tran AN, Wortman JR, Alsmark UC, Angiuoli S, Anupama A, Badger J, Bringaud F, Cadag E, Carlton JM, Cerqueira GC, Creasy T, Delcher AL, Djikeng A, Embley TM, Hauser C, Ivens AC, Kummerfeld SK, Pereira-Leal JB, Nilsson D, Peterson J, Salzberg SL, Shallom J, Silva JC, Sundaram J, Westenberger S, White O, Melville SE, Donelson JE, Andersson B, Stuart KD, Hall N.

Science. 2005 Jul 15;309(5733):404-9.

13.

Messenger RNA processing sites in Trypanosoma brucei.

Benz C, Nilsson D, Andersson B, Clayton C, Guilbride DL.

Mol Biochem Parasitol. 2005 Oct;143(2):125-34.

PMID:
15993496
14.

trans and cis splicing in trypanosomatids: mechanism, factors, and regulation.

Liang XH, Haritan A, Uliel S, Michaeli S.

Eukaryot Cell. 2003 Oct;2(5):830-40. Review. No abstract available.

15.
16.

Conserved nucleotides surrounding the trans-splicing acceptor site and the translation initiation codon in Leishmania genes.

Requena JM, Quijada L, Soto M, Alonso C.

Exp Parasitol. 2003 Jan-Feb;103(1-2):78-81. No abstract available.

PMID:
12810050
17.

Sequence determinants in human polyadenylation site selection.

Legendre M, Gautheret D.

BMC Genomics. 2003 Feb 25;4(1):7. Epub 2003 Feb 25.

18.

Life without transcriptional control? From fly to man and back again.

Clayton CE.

EMBO J. 2002 Apr 15;21(8):1881-8. Review. No abstract available. Erratum in: EMBO J 2002 Jul 15;21(14):3917.

19.

A common mechanism of stage-regulated gene expression in Leishmania mediated by a conserved 3'-untranslated region element.

Boucher N, Wu Y, Dumas C, Dube M, Sereno D, Breton M, Papadopoulou B.

J Biol Chem. 2002 May 31;277(22):19511-20. Epub 2002 Mar 23.

20.

Non-coding RNA genes and the modern RNA world.

Eddy SR.

Nat Rev Genet. 2001 Dec;2(12):919-29. Review.

PMID:
11733745

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