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Items: 1 to 20 of 23


The zebrafish activating immune receptor Nitr9 signals via Dap12.

Wei S, Zhou JM, Chen X, Shah RN, Liu J, Orcutt TM, Traver D, Djeu JY, Litman GW, Yoder JA.

Immunogenetics. 2007 Oct;59(10):813-21. Epub 2007 Sep 21.


Structural characteristics of zebrafish orthologs of adaptor molecules that associate with transmembrane immune receptors.

Yoder JA, Orcutt TM, Traver D, Litman GW.

Gene. 2007 Oct 15;401(1-2):154-64. Epub 2007 Jul 27.


Definition of the zebrafish genome using flow cytometry and cytogenetic mapping.

Freeman JL, Adeniyi A, Banerjee R, Dallaire S, Maguire SF, Chi J, Ng BL, Zepeda C, Scott CE, Humphray S, Rogers J, Zhou Y, Zon LI, Carter NP, Yang F, Lee C.

BMC Genomics. 2007 Jun 27;8:195.


A unique T cell receptor discovered in marsupials.

Parra ZE, Baker ML, Schwarz RS, Deakin JE, Lindblad-Toh K, Miller RD.

Proc Natl Acad Sci U S A. 2007 Jun 5;104(23):9776-81. Epub 2007 May 29.


Characterization of additional novel immune type receptors in channel catfish, Ictalurus punctatus.

Evenhuis J, Bengtén E, Snell C, Quiniou SM, Miller NW, Wilson M.

Immunogenetics. 2007 Aug;59(8):661-71. Epub 2007 May 30.


A novel immune-type receptor of Japanese flounder (Paralichthys olivaceus) is expressed in both T and B lymphocytes.

Piyaviriyakul P, Kondo H, Hirono I, Aoki T.

Fish Shellfish Immunol. 2007 May;22(5):467-76. Epub 2006 Jun 8.


Composition-based statistics and translated nucleotide searches: improving the TBLASTN module of BLAST.

Gertz EM, Yu YK, Agarwala R, Schäffer AA, Altschul SF.

BMC Biol. 2006 Dec 7;4:41.


Immune-related, lectin-like receptors are differentially expressed in the myeloid and lymphoid lineages of zebrafish.

Panagos PG, Dobrinski KP, Chen X, Grant AW, Traver D, Djeu JY, Wei S, Yoder JA.

Immunogenetics. 2006 Feb;58(1):31-40. Epub 2006 Feb 9.


IMGT/LIGM-DB, the IMGT comprehensive database of immunoglobulin and T cell receptor nucleotide sequences.

Giudicelli V, Duroux P, Ginestoux C, Folch G, Jabado-Michaloud J, Chaume D, Lefranc MP.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D781-4.


Single haplotype analysis demonstrates rapid evolution of the killer immunoglobulin-like receptor (KIR) loci in primates.

Sambrook JG, Bashirova A, Palmer S, Sims S, Trowsdale J, Abi-Rached L, Parham P, Carrington M, Beck S.

Genome Res. 2005 Jan;15(1):25-35.


Resolution of the novel immune-type receptor gene cluster in zebrafish.

Yoder JA, Litman RT, Mueller MG, Desai S, Dobrinski KP, Montgomery JS, Buzzeo MP, Ota T, Amemiya CT, Trede NS, Wei S, Djeu JY, Humphray S, Jekosch K, Hernandez Prada JA, Ostrov DA, Litman GW.

Proc Natl Acad Sci U S A. 2004 Nov 2;101(44):15706-11. Epub 2004 Oct 20.


SMART 4.0: towards genomic data integration.

Letunic I, Copley RR, Schmidt S, Ciccarelli FD, Doerks T, Schultz J, Ponting CP, Bork P.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D142-4.


Multiple sequence alignment with the Clustal series of programs.

Chenna R, Sugawara H, Koike T, Lopez R, Gibson TJ, Higgins DG, Thompson JD.

Nucleic Acids Res. 2003 Jul 1;31(13):3497-500.


Cloning novel immune-type inhibitory receptors from the rainbow trout, Oncorhynchus mykiss.

Yoder JA, Mueller MG, Nichols KM, Ristow SS, Thorgaard GH, Ota T, Litman GW.

Immunogenetics. 2002 Dec;54(9):662-70. Epub 2002 Nov 16.


MEGA2: molecular evolutionary genetics analysis software.

Kumar S, Tamura K, Jakobsen IB, Nei M.

Bioinformatics. 2001 Dec;17(12):1244-5.


Extraordinary variation in a diversified family of immune-type receptor genes.

Hawke NA, Yoder JA, Haire RN, Mueller MG, Litman RT, Miracle AL, Stuge T, Shen L, Miller N, Litman GW.

Proc Natl Acad Sci U S A. 2001 Nov 20;98(24):13832-7. Epub 2001 Nov 6.


Novel immune-type receptor genes.

Litman GW, Hawke NA, Yoder JA.

Immunol Rev. 2001 Jun;181:250-9. Review.


Immune-type receptor genes in zebrafish share genetic and functional properties with genes encoded by the mammalian leukocyte receptor cluster.

Yoder JA, Mueller MG, Wei S, Corliss BC, Prather DM, Willis T, Litman RT, Djeu JY, Litman GW.

Proc Natl Acad Sci U S A. 2001 Jun 5;98(12):6771-6. Epub 2001 May 29.


PipMaker--a web server for aligning two genomic DNA sequences.

Schwartz S, Zhang Z, Frazer KA, Smit A, Riemer C, Bouck J, Gibbs R, Hardison R, Miller W.

Genome Res. 2000 Apr;10(4):577-86.

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