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Items: 1 to 20 of 41

1.

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection.

Baba T, Ara T, Hasegawa M, Takai Y, Okumura Y, Baba M, Datsenko KA, Tomita M, Wanner BL, Mori H.

Mol Syst Biol. 2006;2:2006.0008.

2.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.

Hayashi K, Morooka N, Yamamoto Y, Fujita K, Isono K, Choi S, Ohtsubo E, Baba T, Wanner BL, Mori H, Horiuchi T.

Mol Syst Biol. 2006;2:2006.0007.

3.

Emergent properties of reduced-genome Escherichia coli.

Pósfai G, Plunkett G 3rd, Fehér T, Frisch D, Keil GM, Umenhoffer K, Kolisnychenko V, Stahl B, Sharma SS, de Arruda M, Burland V, Harcum SW, Blattner FR.

Science. 2006 May 19;312(5776):1044-6.

4.
5.

Escherichia coli K-12: a cooperatively developed annotation snapshot--2005.

Riley M, Abe T, Arnaud MB, Berlyn MK, Blattner FR, Chaudhuri RR, Glasner JD, Horiuchi T, Keseler IM, Kosuge T, Mori H, Perna NT, Plunkett G 3rd, Rudd KE, Serres MH, Thomas GH, Thomson NR, Wishart D, Wanner BL.

Nucleic Acids Res. 2006 Jan 5;34(1):1-9.

6.

ASAP: a resource for annotating, curating, comparing, and disseminating genomic data.

Glasner JD, Rusch M, Liss P, Plunkett G 3rd, Cabot EL, Darling A, Anderson BD, Infield-Harm P, Gilson MC, Perna NT.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D41-5.

7.

ISfinder: the reference centre for bacterial insertion sequences.

Siguier P, Perochon J, Lestrade L, Mahillon J, Chandler M.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D32-6.

8.

Characterization of cycA mutants of Escherichia coli. An assay for measuring in vivo mutation rates.

Fehér T, Cseh B, Umenhoffer K, Karcagi I, Pósfai G.

Mutat Res. 2006 Mar 20;595(1-2):184-90.

PMID:
16376388
9.

Genome sequencing in microfabricated high-density picolitre reactors.

Margulies M, Egholm M, Altman WE, Attiya S, Bader JS, Bemben LA, Berka J, Braverman MS, Chen YJ, Chen Z, Dewell SB, Du L, Fierro JM, Gomes XV, Godwin BC, He W, Helgesen S, Ho CH, Irzyk GP, Jando SC, Alenquer ML, Jarvie TP, Jirage KB, Kim JB, Knight JR, Lanza JR, Leamon JH, Lefkowitz SM, Lei M, Li J, Lohman KL, Lu H, Makhijani VB, McDade KE, McKenna MP, Myers EW, Nickerson E, Nobile JR, Plant R, Puc BP, Ronan MT, Roth GT, Sarkis GJ, Simons JF, Simpson JW, Srinivasan M, Tartaro KR, Tomasz A, Vogt KA, Volkmer GA, Wang SH, Wang Y, Weiner MP, Yu P, Begley RF, Rothberg JM.

Nature. 2005 Sep 15;437(7057):376-80. Erratum in: Nature. 2006 May 4;441(7089):120. Ho, Chun He [corrected to Ho, Chun Heen].

10.

Mauve: multiple alignment of conserved genomic sequence with rearrangements.

Darling AC, Mau B, Blattner FR, Perna NT.

Genome Res. 2004 Jul;14(7):1394-403.

11.

ASAP, a systematic annotation package for community analysis of genomes.

Glasner JD, Liss P, Plunkett G 3rd, Darling A, Prasad T, Rusch M, Byrnes A, Gilson M, Biehl B, Blattner FR, Perna NT.

Nucleic Acids Res. 2003 Jan 1;31(1):147-51.

12.

Transposition of IS10 from the host Escherichia coli genome to a plasmid may lead to cloning artefacts.

Kovarík A, Matzke MA, Matzke AJ, Koulaková B.

Mol Genet Genomics. 2001 Oct;266(2):216-22.

PMID:
11683262
13.

The Escherichia coli ATP-binding cassette (ABC) proteins.

Linton KJ, Higgins CF.

Mol Microbiol. 1998 Apr;28(1):5-13. Review.

14.

Activation of the bgl operon by adaptive mutation.

Hall BG.

Mol Biol Evol. 1998 Jan;15(1):1-5.

PMID:
9491599
15.

Increasing consensus accuracy in DNA fragment assemblies by incorporating fluorescent trace representations.

Allex CF, Baldwin SF, Shavlik JW, Blattner FR.

Proc Int Conf Intell Syst Mol Biol. 1997;5:3-14.

PMID:
9322009
16.

The complete genome sequence of Escherichia coli K-12.

Blattner FR, Plunkett G 3rd, Bloch CA, Perna NT, Burland V, Riley M, Collado-Vides J, Glasner JD, Rode CK, Mayhew GF, Gregor J, Davis NW, Kirkpatrick HA, Goeden MA, Rose DJ, Mau B, Shao Y.

Science. 1997 Sep 5;277(5331):1453-62.

PMID:
9278503
18.

Mutations in NADH:ubiquinone oxidoreductase of Escherichia coli affect growth on mixed amino acids.

Prüss BM, Nelms JM, Park C, Wolfe AJ.

J Bacteriol. 1994 Apr;176(8):2143-50.

19.

Analysis of gene control signals by DNA fusion and cloning in Escherichia coli.

Casadaban MJ, Cohen SN.

J Mol Biol. 1980 Apr;138(2):179-207. No abstract available.

PMID:
6997493
20.
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