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Items: 1 to 20 of 34

1.

All-atom empirical potential for molecular modeling and dynamics studies of proteins.

MacKerell AD, Bashford D, Bellott M, Dunbrack RL, Evanseck JD, Field MJ, Fischer S, Gao J, Guo H, Ha S, Joseph-McCarthy D, Kuchnir L, Kuczera K, Lau FT, Mattos C, Michnick S, Ngo T, Nguyen DT, Prodhom B, Reiher WE, Roux B, Schlenkrich M, Smith JC, Stote R, Straub J, Watanabe M, Wiórkiewicz-Kuczera J, Yin D, Karplus M.

J Phys Chem B. 1998 Apr 30;102(18):3586-616. doi: 10.1021/jp973084f.

PMID:
24889800
2.

Nanoscale mechanical characterisation of amyloid fibrils discovered in a natural adhesive.

Mostaert AS, Higgins MJ, Fukuma T, Rindi F, Jarvis SP.

J Biol Phys. 2006 Nov;32(5):393-401. doi: 10.1007/s10867-006-9023-y. Epub 2006 Oct 5.

3.

Single-molecule experiments in vitro and in silico.

Sotomayor M, Schulten K.

Science. 2007 May 25;316(5828):1144-8. Review.

PMID:
17525328
4.

Characterization of actomyosin bond properties in intact skeletal muscle by force spectroscopy.

Colombini B, Bagni MA, Romano G, Cecchi G.

Proc Natl Acad Sci U S A. 2007 May 29;104(22):9284-9. Epub 2007 May 21.

5.

Equilibrium unfolding of the poly(glutamic acid)20 helix.

Finke JM, Jennings PA, Lee JC, Onuchic JN, Winkler JR.

Biopolymers. 2007 Jun 15;86(3):193-211.

PMID:
17370320
6.

Elasticity of alpha-helical coiled coils.

Wolgemuth CW, Sun SX.

Phys Rev Lett. 2006 Dec 15;97(24):248101. Epub 2006 Dec 15. Erratum in: Phys Rev Lett. 2008 Apr 25;100(16):169901.

PMID:
17280328
7.

Mechanical unfolding of proteins: insights into biology, structure and folding.

Forman JR, Clarke J.

Curr Opin Struct Biol. 2007 Feb;17(1):58-66. Epub 2007 Jan 23. Review.

PMID:
17251000
8.

Characterization of the nanoscale properties of individual amyloid fibrils.

Smith JF, Knowles TP, Dobson CM, Macphee CE, Welland ME.

Proc Natl Acad Sci U S A. 2006 Oct 24;103(43):15806-11. Epub 2006 Oct 12.

9.

Breaking bonds in the atomic force microscope: theory and analysis.

Hanke F, Kreuzer HJ.

Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Sep;74(3 Pt 1):031909. Epub 2006 Sep 22.

PMID:
17025669
10.

Anisotropic deformation response of single protein molecules.

Dietz H, Berkemeier F, Bertz M, Rief M.

Proc Natl Acad Sci U S A. 2006 Aug 22;103(34):12724-8. Epub 2006 Aug 14.

11.
12.

Nanomechanical properties of desmin intermediate filaments.

Kiss B, Karsai A, Kellermayer MS.

J Struct Biol. 2006 Aug;155(2):327-39. Epub 2006 Apr 27.

PMID:
16714122
13.

3D structure of Alzheimer's amyloid-beta(1-42) fibrils.

Lührs T, Ritter C, Adrian M, Riek-Loher D, Bohrmann B, Döbeli H, Schubert D, Riek R.

Proc Natl Acad Sci U S A. 2005 Nov 29;102(48):17342-7. Epub 2005 Nov 17.

14.

Design and crystal structure of bacteriophage T4 mini-fibritin NCCF.

Boudko SP, Strelkov SV, Engel J, Stetefeld J.

J Mol Biol. 2004 Jun 11;339(4):927-35.

PMID:
15165860
15.

Assessing the flexibility of intermediate filaments by atomic force microscopy.

Mücke N, Kreplak L, Kirmse R, Wedig T, Herrmann H, Aebi U, Langowski J.

J Mol Biol. 2004 Jan 30;335(5):1241-50.

PMID:
14729340
16.

Intermediate filaments are dynamic and motile elements of cellular architecture.

Helfand BT, Chang L, Goldman RD.

J Cell Sci. 2004 Jan 15;117(Pt 2):133-41. Review.

17.

Historical review: another 50th anniversary--new periodicities in coiled coils.

Gruber M, Lupas AN.

Trends Biochem Sci. 2003 Dec;28(12):679-85. Review.

PMID:
14659700
18.

Energetics of hydrogen bonds in peptides.

Sheu SY, Yang DY, Selzle HL, Schlag EW.

Proc Natl Acad Sci U S A. 2003 Oct 28;100(22):12683-7. Epub 2003 Oct 14.

19.

Mechanics of vimentin intermediate filaments.

Wang N, Stamenovic D.

J Muscle Res Cell Motil. 2002;23(5-6):535-40. Review.

PMID:
12785103
20.

Unfolding of titin domains studied by molecular dynamics simulations.

Gao M, Lu H, Schulten K.

J Muscle Res Cell Motil. 2002;23(5-6):513-21.

PMID:
12785101

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