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Items: 1 to 20 of 24

1.

ScanProsite: a reference implementation of a PROSITE scanning tool.

Gattiker A, Gasteiger E, Bairoch A.

Appl Bioinformatics. 2002;1(2):107-8.

PMID:
15130850
2.

The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003.

Boeckmann B, Bairoch A, Apweiler R, Blatter MC, Estreicher A, Gasteiger E, Martin MJ, Michoud K, O'Donovan C, Phan I, Pilbout S, Schneider M.

Nucleic Acids Res. 2003 Jan 1;31(1):365-70.

3.

FindPept, a tool to identify unmatched masses in peptide mass fingerprinting protein identification.

Gattiker A, Bienvenut WV, Bairoch A, Gasteiger E.

Proteomics. 2002 Oct;2(10):1435-44.

PMID:
12422360
4.

High-quality protein knowledge resource: SWISS-PROT and TrEMBL.

O'Donovan C, Martin MJ, Gattiker A, Gasteiger E, Bairoch A, Apweiler R.

Brief Bioinform. 2002 Sep;3(3):275-84.

PMID:
12230036
5.

PROSITE: a documented database using patterns and profiles as motif descriptors.

Sigrist CJ, Cerutti L, Hulo N, Gattiker A, Falquet L, Pagni M, Bairoch A, Bucher P.

Brief Bioinform. 2002 Sep;3(3):265-74.

PMID:
12230035
6.

The Sulfinator: predicting tyrosine sulfation sites in protein sequences.

Monigatti F, Gasteiger E, Bairoch A, Jung E.

Bioinformatics. 2002 May;18(5):769-70.

PMID:
12050077
7.

The PROSITE database, its status in 2002.

Falquet L, Pagni M, Bucher P, Hulo N, Sigrist CJ, Hofmann K, Bairoch A.

Nucleic Acids Res. 2002 Jan 1;30(1):235-8.

8.

GlycoMod--a software tool for determining glycosylation compositions from mass spectrometric data.

Cooper CA, Gasteiger E, Packer NH.

Proteomics. 2001 Feb;1(2):340-9.

PMID:
11680880
9.

SWISS-PROT: connecting biomolecular knowledge via a protein database.

Gasteiger E, Jung E, Bairoch A.

Curr Issues Mol Biol. 2001 Jul;3(3):47-55. Review.

10.

The ENZYME database in 2000.

Bairoch A.

Nucleic Acids Res. 2000 Jan 1;28(1):304-5.

11.

The 1999 SWISS-2DPAGE database update.

Hoogland C, Sanchez JC, Tonella L, Binz PA, Bairoch A, Hochstrasser DF, Appel RD.

Nucleic Acids Res. 2000 Jan 1;28(1):286-8.

12.

High-throughput mass spectrometric discovery of protein post-translational modifications.

Wilkins MR, Gasteiger E, Gooley AA, Herbert BR, Molloy MP, Binz PA, Ou K, Sanchez JC, Bairoch A, Williams KL, Hochstrasser DF.

J Mol Biol. 1999 Jun 11;289(3):645-57.

PMID:
10356335
13.

Multiple parameter cross-species protein identification using MultiIdent--a world-wide web accessible tool.

Wilkins MR, Gasteiger E, Wheeler CH, Lindskog I, Sanchez JC, Bairoch A, Appel RD, Dunn MJ, Hochstrasser DF.

Electrophoresis. 1998 Dec;19(18):3199-206.

PMID:
9932815
14.

From proteins to proteomes: large scale protein identification by two-dimensional electrophoresis and amino acid analysis.

Wilkins MR, Pasquali C, Appel RD, Ou K, Golaz O, Sanchez JC, Yan JX, Gooley AA, Hughes G, Humphery-Smith I, Williams KL, Hochstrasser DF.

Biotechnology (N Y). 1996 Jan;14(1):61-5.

PMID:
9636313
15.

Protein identification with N and C-terminal sequence tags in proteome projects.

Wilkins MR, Gasteiger E, Tonella L, Ou K, Tyler M, Sanchez JC, Gooley AA, Walsh BJ, Bairoch A, Appel RD, Williams KL, Hochstrasser DF.

J Mol Biol. 1998 May 8;278(3):599-608.

PMID:
9600841
16.

SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling.

Guex N, Peitsch MC.

Electrophoresis. 1997 Dec;18(15):2714-23.

PMID:
9504803
17.

Large scale protein modelling and model repository.

Peitsch MC.

Proc Int Conf Intell Syst Mol Biol. 1997;5:234-6.

PMID:
9322042
18.

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ.

Nucleic Acids Res. 1997 Sep 1;25(17):3389-402. Review.

19.

Detailed peptide characterization using PEPTIDEMASS--a World-Wide-Web-accessible tool.

Wilkins MR, Lindskog I, Gasteiger E, Bairoch A, Sanchez JC, Hochstrasser DF, Appel RD.

Electrophoresis. 1997 Mar-Apr;18(3-4):403-8.

PMID:
9150918
20.

LALNVIEW: a graphical viewer for pairwise sequence alignments.

Duret L, Gasteiger E, Perrière G.

Comput Appl Biosci. 1996 Dec;12(6):507-10.

PMID:
9021269

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