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Items: 1 to 20 of 120

1.

Protein superfamilies and domain superfolds.

Orengo CA, Jones DT, Thornton JM.

Nature. 1994 Dec 15;372(6507):631-4.

PMID:
7990952
2.

Supersites within superfolds. Binding site similarity in the absence of homology.

Russell RB, Sasieni PD, Sternberg MJ.

J Mol Biol. 1998 Oct 2;282(4):903-18.

PMID:
9743635
4.

The CATH Database provides insights into protein structure/function relationships.

Orengo CA, Pearl FM, Bray JE, Todd AE, Martin AC, Lo Conte L, Thornton JM.

Nucleic Acids Res. 1999 Jan 1;27(1):275-9.

5.

Recognizing the fold of a protein structure.

Harrison A, Pearl F, Sillitoe I, Slidel T, Mott R, Thornton J, Orengo C.

Bioinformatics. 2003 Sep 22;19(14):1748-59.

PMID:
14512345
6.

Protein folds and families: sequence and structure alignments.

Holm L, Sander C.

Nucleic Acids Res. 1999 Jan 1;27(1):244-7.

8.

Contemporary approaches to protein structure classification.

Swindells MB, Orengo CA, Jones DT, Hutchinson EG, Thornton JM.

Bioessays. 1998 Nov;20(11):884-91. Review.

PMID:
9872054
10.

Identification of homology in protein structure classification.

Dietmann S, Holm L.

Nat Struct Biol. 2001 Nov;8(11):953-7.

PMID:
11685241
11.

Assigning new GO annotations to protein data bank sequences by combining structure and sequence homology.

Ponomarenko JV, Bourne PE, Shindyalov IN.

Proteins. 2005 Mar 1;58(4):855-65.

PMID:
15645518
12.
13.

Protein folds, functions and evolution.

Thornton JM, Orengo CA, Todd AE, Pearl FM.

J Mol Biol. 1999 Oct 22;293(2):333-42. Review.

PMID:
10529349
14.

Protein structural domains: analysis of the 3Dee domains database.

Dengler U, Siddiqui AS, Barton GJ.

Proteins. 2001 Feb 15;42(3):332-44.

PMID:
11151005
15.
16.

Recognition of analogous and homologous protein folds: analysis of sequence and structure conservation.

Russell RB, Saqi MA, Sayle RA, Bates PA, Sternberg MJ.

J Mol Biol. 1997 Jun 13;269(3):423-39.

PMID:
9199410
17.

Hierarchical learning architecture with automatic feature selection for multiclass protein fold classification.

Huang CD, Lin CT, Pal NR.

IEEE Trans Nanobioscience. 2003 Dec;2(4):221-32.

PMID:
15376912
18.

An alternative view of protein fold space.

Shindyalov IN, Bourne PE.

Proteins. 2000 Feb 15;38(3):247-60.

PMID:
10713986
19.

Evolution of function in protein superfamilies, from a structural perspective.

Todd AE, Orengo CA, Thornton JM.

J Mol Biol. 2001 Apr 6;307(4):1113-43.

PMID:
11286560
20.

Touring protein fold space with Dali/FSSP.

Holm L, Sander C.

Nucleic Acids Res. 1998 Jan 1;26(1):316-9.

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