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Items: 1 to 20 of 78

1.

A procedure for detecting structural domains in proteins.

Swindells MB.

Protein Sci. 1995 Jan;4(1):103-12.

2.

Inferring boundary information of discontinuous-domain proteins.

Sikder AR, Zomaya AY.

IEEE Trans Nanobioscience. 2008 Sep;7(3):200-5. doi: 10.1109/TNB.2008.2002283.

PMID:
18779100
3.

CATHEDRAL: a fast and effective algorithm to predict folds and domain boundaries from multidomain protein structures.

Redfern OC, Harrison A, Dallman T, Pearl FM, Orengo CA.

PLoS Comput Biol. 2007 Nov;3(11):e232.

4.

Escherichia coli GlpE is a prototype sulfurtransferase for the single-domain rhodanese homology superfamily.

Spallarossa A, Donahue JL, Larson TJ, Bolognesi M, Bordo D.

Structure. 2001 Nov;9(11):1117-25.

5.
6.

Automatic prediction of protein domains from sequence information using a hybrid learning system.

Nagarajan N, Yona G.

Bioinformatics. 2004 Jun 12;20(9):1335-60. Epub 2004 Feb 12.

PMID:
14962932
7.

SnapDRAGON: a method to delineate protein structural domains from sequence data.

George RA, Heringa J.

J Mol Biol. 2002 Feb 22;316(3):839-51.

PMID:
11866536
8.

A comprehensive and non-redundant database of protein domain movements.

Qi G, Lee R, Hayward S.

Bioinformatics. 2005 Jun 15;21(12):2832-8. Epub 2005 Mar 31.

PMID:
15802286
10.

Docking protein domains in contact space.

Lise S, Walker-Taylor A, Jones DT.

BMC Bioinformatics. 2006 Jun 21;7:310.

11.
12.

Identifying foldable regions in protein sequence from the hydrophobic signal.

Pang CN, Lin K, Wouters MA, Heringa J, George RA.

Nucleic Acids Res. 2008 Feb;36(2):578-88. Epub 2007 Dec 1.

13.

Armadillo: domain boundary prediction by amino acid composition.

Dumontier M, Yao R, Feldman HJ, Hogue CW.

J Mol Biol. 2005 Jul 29;350(5):1061-73.

PMID:
15978619
14.

Designing amino acid sequences to fold with good hydrophobic cores.

Sun S, Brem R, Chan HS, Dill KA.

Protein Eng. 1995 Dec;8(12):1205-13.

PMID:
8869633
15.

Improving the performance of DomainParser for structural domain partition using neural network.

Guo JT, Xu D, Kim D, Xu Y.

Nucleic Acids Res. 2003 Feb 1;31(3):944-52.

17.

A method to identify protein sequences that fold into a known three-dimensional structure.

Bowie JU, L├╝thy R, Eisenberg D.

Science. 1991 Jul 12;253(5016):164-70.

PMID:
1853201
18.

Promiscuous binding nature of SH3 domains to their target proteins.

Agrawal V, Kishan KV.

Protein Pept Lett. 2002 Jun;9(3):185-93. Review.

PMID:
12144515
20.

Origins of structural diversity within sequentially identical hexapeptides.

Cohen BI, Presnell SR, Cohen FE.

Protein Sci. 1993 Dec;2(12):2134-45.

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