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Items: 1 to 20 of 143

1.

Computational discovery and RT-PCR validation of novel Burkholderia conserved and Burkholderia pseudomallei unique sRNAs.

Khoo JS, Chai SF, Mohamed R, Nathan S, Firdaus-Raih M.

BMC Genomics. 2012;13 Suppl 7:S13. doi: 10.1186/1471-2164-13-S7-S13. Epub 2012 Dec 13.

2.

Identification of novel growth phase- and media-dependent small non-coding RNAs in Streptococcus pyogenes M49 using intergenic tiling arrays.

Patenge N, Billion A, Raasch P, Normann J, Wisniewska-Kucper A, Retey J, Boisguérin V, Hartsch T, Hain T, Kreikemeyer B.

BMC Genomics. 2012 Oct 13;13:550. doi: 10.1186/1471-2164-13-550.

3.

sRNAscanner: a computational tool for intergenic small RNA detection in bacterial genomes.

Sridhar J, Sambaturu N, Sabarinathan R, Ou HY, Deng Z, Sekar K, Rafi ZA, Rajakumar K.

PLoS One. 2010 Aug 5;5(8):e11970. doi: 10.1371/journal.pone.0011970. Erratum in: PLoS One. 2010;5(9). doi: 10.1371/annotation/71408e55-e1d3-4950-9c3b-d3a3ad66a1ff. Narmada, Suryanarayanan Ramkumar [corrected to Sambaturu, Narmada].

4.

In silico analysis of Burkholderia pseudomallei genome sequence for potential drug targets.

Chong CE, Lim BS, Nathan S, Mohamed R.

In Silico Biol. 2006;6(4):341-6.

PMID:
16922696
5.
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7.

Identification of small RNAs in Francisella tularensis.

Postic G, Frapy E, Dupuis M, Dubail I, Livny J, Charbit A, Meibom KL.

BMC Genomics. 2010 Nov 10;11:625. doi: 10.1186/1471-2164-11-625.

8.

Genomic patterns of pathogen evolution revealed by comparison of Burkholderia pseudomallei, the causative agent of melioidosis, to avirulent Burkholderia thailandensis.

Yu Y, Kim HS, Chua HH, Lin CH, Sim SH, Lin D, Derr A, Engels R, DeShazer D, Birren B, Nierman WC, Tan P.

BMC Microbiol. 2006 May 26;6:46.

9.
10.

Multilocus sequence typing and evolutionary relationships among the causative agents of melioidosis and glanders, Burkholderia pseudomallei and Burkholderia mallei.

Godoy D, Randle G, Simpson AJ, Aanensen DM, Pitt TL, Kinoshita R, Spratt BG.

J Clin Microbiol. 2003 May;41(5):2068-79. Erratum in: J Clin Microbiol. 2003 Oct;41(10):4913.

11.

Genome-wide identification and mapping of variable sequences in the genomes of Burkholderia mallei and Burkholderia pseudomallei.

Fushan A, Monastyrskaya G, Abaev I, Kostina M, Filyukova O, Pecherskih E, Sverdlov E.

Res Microbiol. 2005 Mar;156(2):278-88. Epub 2004 Dec 1.

PMID:
15748995
12.

Differential expression of small RNAs from Burkholderia thailandensis in response to varying environmental and stress conditions.

Stubben CJ, Micheva-Viteva SN, Shou Y, Buddenborg SK, Dunbar JM, Hong-Geller E.

BMC Genomics. 2014 May 19;15:385. doi: 10.1186/1471-2164-15-385.

13.

Distribution of type III secretion gene clusters in Burkholderia pseudomallei, B. thailandensis and B. mallei.

Rainbow L, Hart CA, Winstanley C.

J Med Microbiol. 2002 May;51(5):374-84.

PMID:
11990489
14.

Functional reconstitution, gene isolation and topology modelling of porins from Burkholderia pseudomallei and Burkholderia thailandensis.

Siritapetawee J, Prinz H, Samosornsuk W, Ashley RH, Suginta W.

Biochem J. 2004 Feb 1;377(Pt 3):579-87.

15.

A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti.

Schlüter JP, Reinkensmeier J, Daschkey S, Evguenieva-Hackenberg E, Janssen S, Jänicke S, Becker JD, Giegerich R, Becker A.

BMC Genomics. 2010 Apr 17;11:245. doi: 10.1186/1471-2164-11-245.

16.

Identification and characterization of RpoS regulon and RpoS-dependent promoters in Burkholderia pseudomallei.

Osiriphun Y, Wongtrakoongate P, Sanongkiet S, Suriyaphol P, Thongboonkerd V, Tungpradabkul S.

J Proteome Res. 2009 Jun;8(6):3118-31. doi: 10.1021/pr900066h.

PMID:
19364128
17.

Burkholderia thailandensis as a model system for the study of the virulence-associated type III secretion system of Burkholderia pseudomallei.

Haraga A, West TE, Brittnacher MJ, Skerrett SJ, Miller SI.

Infect Immun. 2008 Nov;76(11):5402-11. doi: 10.1128/IAI.00626-08. Epub 2008 Sep 8.

18.

Comparative proteomic profiles and the potential markers between Burkholderia pseudomallei and Burkholderia thailandensis.

Wongtrakoongate P, Mongkoldhumrongkul N, Chaijan S, Kamchonwongpaisan S, Tungpradabkul S.

Mol Cell Probes. 2007 Apr;21(2):81-91. Epub 2006 Sep 3.

PMID:
17030112

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