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Items: 1 to 20 of 81

1.

Duplex destabilization by four ribosomal DEAD-box proteins.

Garcia I, Albring MJ, Uhlenbeck OC.

Biochemistry. 2012 Dec 18;51(50):10109-18. doi: 10.1021/bi301172s. Epub 2012 Dec 4.

PMID:
23153376
2.

The mechanism of ATP-dependent RNA unwinding by DEAD box proteins.

Hilbert M, Karow AR, Klostermeier D.

Biol Chem. 2009 Dec;390(12):1237-50. doi: 10.1515/BC.2009.135. Review.

PMID:
19747077
3.
4.

ATP hydrolysis is required for DEAD-box protein recycling but not for duplex unwinding.

Liu F, Putnam A, Jankowsky E.

Proc Natl Acad Sci U S A. 2008 Dec 23;105(51):20209-14. doi: 10.1073/pnas.0811115106. Epub 2008 Dec 16.

5.

Differential RNA-dependent ATPase activities of four rRNA processing yeast DEAD-box proteins.

Garcia I, Uhlenbeck OC.

Biochemistry. 2008 Nov 25;47(47):12562-73. doi: 10.1021/bi8016119. Erratum in: Biochemistry. 2009 Feb 3;48(4):810.

6.
7.

Structural basis for RNA-duplex recognition and unwinding by the DEAD-box helicase Mss116p.

Mallam AL, Del Campo M, Gilman B, Sidote DJ, Lambowitz AM.

Nature. 2012 Oct 4;490(7418):121-5. doi: 10.1038/nature11402. Epub 2012 Sep 2.

8.

Motif III in superfamily 2 "helicases" helps convert the binding energy of ATP into a high-affinity RNA binding site in the yeast DEAD-box protein Ded1.

Banroques J, Doère M, Dreyfus M, Linder P, Tanner NK.

J Mol Biol. 2010 Mar 5;396(4):949-66. doi: 10.1016/j.jmb.2009.12.025. Epub 2009 Dec 21.

PMID:
20026132
9.

Characterization of the essential activities of Saccharomyces cerevisiae Mtr4p, a 3'->5' helicase partner of the nuclear exosome.

Bernstein J, Patterson DN, Wilson GM, Toth EA.

J Biol Chem. 2008 Feb 22;283(8):4930-42. Epub 2007 Dec 20.

10.

Pathway of ATP utilization and duplex rRNA unwinding by the DEAD-box helicase, DbpA.

Henn A, Cao W, Licciardello N, Heitkamp SE, Hackney DD, De La Cruz EM.

Proc Natl Acad Sci U S A. 2010 Mar 2;107(9):4046-50. doi: 10.1073/pnas.0913081107. Epub 2010 Feb 16. Erratum in: Proc Natl Acad Sci U S A. 2010 Apr 27;107(17):8041.

11.

DEAD-box proteins unwind duplexes by local strand separation.

Yang Q, Del Campo M, Lambowitz AM, Jankowsky E.

Mol Cell. 2007 Oct 26;28(2):253-63.

12.

The DEAD-box protein Ded1 unwinds RNA duplexes by a mode distinct from translocating helicases.

Yang Q, Jankowsky E.

Nat Struct Mol Biol. 2006 Nov;13(11):981-6. Epub 2006 Oct 29.

PMID:
17072313
13.

The ATPase cycle mechanism of the DEAD-box rRNA helicase, DbpA.

Henn A, Cao W, Hackney DD, De La Cruz EM.

J Mol Biol. 2008 Mar 14;377(1):193-205. doi: 10.1016/j.jmb.2007.12.046. Epub 2007 Dec 28.

14.

Visualization of unwinding activity of duplex RNA by DbpA, a DEAD box helicase, at single-molecule resolution by atomic force microscopy.

Henn A, Medalia O, Shi SP, Steinberg M, Franceschi F, Sagi I.

Proc Natl Acad Sci U S A. 2001 Apr 24;98(9):5007-12. Epub 2001 Apr 10.

15.

A conserved phenylalanine of motif IV in superfamily 2 helicases is required for cooperative, ATP-dependent binding of RNA substrates in DEAD-box proteins.

Banroques J, Cordin O, Doère M, Linder P, Tanner NK.

Mol Cell Biol. 2008 May;28(10):3359-71. doi: 10.1128/MCB.01555-07. Epub 2008 Mar 10.

16.

Synergistic effects of ATP and RNA binding to human DEAD-box protein DDX1.

Kellner JN, Reinstein J, Meinhart A.

Nucleic Acids Res. 2015 Mar 11;43(5):2813-28. doi: 10.1093/nar/gkv106. Epub 2015 Feb 17.

17.
18.

Studies on three E. coli DEAD-box helicases point to an unwinding mechanism different from that of model DNA helicases.

Bizebard T, Ferlenghi I, Iost I, Dreyfus M.

Biochemistry. 2004 Jun 22;43(24):7857-66.

PMID:
15196029
19.

Characterization of DbpA, an Escherichia coli DEAD box protein with ATP independent RNA unwinding activity.

Böddeker N, Stade K, Franceschi F.

Nucleic Acids Res. 1997 Feb 1;25(3):537-45.

20.

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