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H2A.Z landscapes and dual modifications in pluripotent and multipotent stem cells underlie complex genome regulatory functions.

Ku M, Jaffe JD, Koche RP, Rheinbay E, Endoh M, Koseki H, Carr SA, Bernstein BE.

Genome Biol. 2012 Oct 3;13(10):R85. doi: 10.1186/gb-2012-13-10-r85.


Genome-wide analysis of the chromatin composition of histone H2A and H3 variants in mouse embryonic stem cells.

Yukawa M, Akiyama T, Franke V, Mise N, Isagawa T, Suzuki Y, Suzuki MG, Vlahovicek K, Abe K, Aburatani H, Aoki F.

PLoS One. 2014 Mar 21;9(3):e92689. doi: 10.1371/journal.pone.0092689. eCollection 2014.


The histone variant H2A.Z is an important regulator of enhancer activity.

Brunelle M, Nordell Markovits A, Rodrigue S, Lupien M, Jacques PÉ, Gévry N.

Nucleic Acids Res. 2015 Nov 16;43(20):9742-56. doi: 10.1093/nar/gkv825. Epub 2015 Aug 28.


H2A.Z facilitates access of active and repressive complexes to chromatin in embryonic stem cell self-renewal and differentiation.

Hu G, Cui K, Northrup D, Liu C, Wang C, Tang Q, Ge K, Levens D, Crane-Robinson C, Zhao K.

Cell Stem Cell. 2013 Feb 7;12(2):180-92. doi: 10.1016/j.stem.2012.11.003. Epub 2012 Dec 20.


H2A.Z.1 Monoubiquitylation Antagonizes BRD2 to Maintain Poised Chromatin in ESCs.

Surface LE, Fields PA, Subramanian V, Behmer R, Udeshi N, Peach SE, Carr SA, Jaffe JD, Boyer LA.

Cell Rep. 2016 Feb 9;14(5):1142-55. doi: 10.1016/j.celrep.2015.12.100. Epub 2016 Jan 21.


Analysis of active chromatin modifications in early mammalian embryos reveals uncoupling of H2A.Z acetylation and H3K36 trimethylation from embryonic genome activation.

Bošković A, Bender A, Gall L, Ziegler-Birling C, Beaujean N, Torres-Padilla ME.

Epigenetics. 2012 Jul;7(7):747-57. doi: 10.4161/epi.20584. Epub 2012 Jul 1.


H3K9 and H3K14 acetylation co-occur at many gene regulatory elements, while H3K14ac marks a subset of inactive inducible promoters in mouse embryonic stem cells.

Karmodiya K, Krebs AR, Oulad-Abdelghani M, Kimura H, Tora L.

BMC Genomics. 2012 Aug 24;13:424. doi: 10.1186/1471-2164-13-424.


Dynamics of histone variant H3.3 and its coregulation with H2A.Z at enhancers and promoters.

Chen P, Wang Y, Li G.

Nucleus. 2014 Jan-Feb;5(1):21-7. doi: 10.4161/nucl.28067. Epub 2014 Feb 3. Review.


Constitutive promoter occupancy by the MBF-1 activator and chromatin modification of the developmental regulated sea urchin alpha-H2A histone gene.

Di Caro V, Cavalieri V, Melfi R, Spinelli G.

J Mol Biol. 2007 Feb 2;365(5):1285-97. Epub 2006 Nov 3.


Discriminating nucleosomes containing histone H2A.Z or H2A based on genetic and epigenetic information.

Gervais AL, Gaudreau L.

BMC Mol Biol. 2009 Mar 4;10:18. doi: 10.1186/1471-2199-10-18.


Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome.

Heintzman ND, Stuart RK, Hon G, Fu Y, Ching CW, Hawkins RD, Barrera LO, Van Calcar S, Qu C, Ching KA, Wang W, Weng Z, Green RD, Crawford GE, Ren B.

Nat Genet. 2007 Mar;39(3):311-8. Epub 2007 Feb 4.


Transcription-induced chromatin remodeling at the c-myc gene involves the local exchange of histone H2A.Z.

Farris SD, Rubio ED, Moon JJ, Gombert WM, Nelson BH, Krumm A.

J Biol Chem. 2005 Jul 1;280(26):25298-303. Epub 2005 May 6.


PRC1 and PRC2 are not required for targeting of H2A.Z to developmental genes in embryonic stem cells.

Illingworth RS, Botting CH, Grimes GR, Bickmore WA, Eskeland R.

PLoS One. 2012;7(4):e34848. doi: 10.1371/journal.pone.0034848. Epub 2012 Apr 9.


Acetylation of H2A.Z is a key epigenetic modification associated with gene deregulation and epigenetic remodeling in cancer.

Valdés-Mora F, Song JZ, Statham AL, Strbenac D, Robinson MD, Nair SS, Patterson KI, Tremethick DJ, Stirzaker C, Clark SJ.

Genome Res. 2012 Feb;22(2):307-21. doi: 10.1101/gr.118919.110. Epub 2011 Jul 25.


BAF250a Protein Regulates Nucleosome Occupancy and Histone Modifications in Priming Embryonic Stem Cell Differentiation.

Lei I, West J, Yan Z, Gao X, Fang P, Dennis JH, Gnatovskiy L, Wang W, Kingston RE, Wang Z.

J Biol Chem. 2015 Jul 31;290(31):19343-52. doi: 10.1074/jbc.M115.637389. Epub 2015 Jun 12.


H2A.Z acidic patch couples chromatin dynamics to regulation of gene expression programs during ESC differentiation.

Subramanian V, Mazumder A, Surface LE, Butty VL, Fields PA, Alwan A, Torrey L, Thai KK, Levine SS, Bathe M, Boyer LA.

PLoS Genet. 2013;9(8):e1003725. doi: 10.1371/journal.pgen.1003725. Epub 2013 Aug 22.


High-resolution profiling of histone methylations in the human genome.

Barski A, Cuddapah S, Cui K, Roh TY, Schones DE, Wang Z, Wei G, Chepelev I, Zhao K.

Cell. 2007 May 18;129(4):823-37.


Genome-wide analysis identifies a functional association of Tet1 and Polycomb repressive complex 2 in mouse embryonic stem cells.

Neri F, Incarnato D, Krepelova A, Rapelli S, Pagnani A, Zecchina R, Parlato C, Oliviero S.

Genome Biol. 2013 Aug 29;14(8):R91. doi: 10.1186/gb-2013-14-8-r91.


Expression of P. falciparum var genes involves exchange of the histone variant H2A.Z at the promoter.

Petter M, Lee CC, Byrne TJ, Boysen KE, Volz J, Ralph SA, Cowman AF, Brown GV, Duffy MF.

PLoS Pathog. 2011 Feb;7(2):e1001292. doi: 10.1371/journal.ppat.1001292. Epub 2011 Feb 17.

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