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Items: 1 to 20 of 83

1.

A census of human soluble protein complexes.

Havugimana PC, Hart GT, Nepusz T, Yang H, Turinsky AL, Li Z, Wang PI, Boutz DR, Fong V, Phanse S, Babu M, Craig SA, Hu P, Wan C, Vlasblom J, Dar VU, Bezginov A, Clark GW, Wu GC, Wodak SJ, Tillier ER, Paccanaro A, Marcotte EM, Emili A.

Cell. 2012 Aug 31;150(5):1068-81. doi: 10.1016/j.cell.2012.08.011.

2.

Panorama of ancient metazoan macromolecular complexes.

Wan C, Borgeson B, Phanse S, Tu F, Drew K, Clark G, Xiong X, Kagan O, Kwan J, Bezginov A, Chessman K, Pal S, Cromar G, Papoulas O, Ni Z, Boutz DR, Stoilova S, Havugimana PC, Guo X, Malty RH, Sarov M, Greenblatt J, Babu M, Derry WB, Tillier ER, Wallingford JB, Parkinson J, Marcotte EM, Emili A.

Nature. 2015 Sep 17;525(7569):339-44. doi: 10.1038/nature14877. Epub 2015 Sep 7.

4.

Interaction proteomics: characterization of protein complexes using tandem affinity purification-mass spectrometry.

Völkel P, Le Faou P, Angrand PO.

Biochem Soc Trans. 2010 Aug;38(4):883-7. doi: 10.1042/BST0380883. Review.

PMID:
20658971
5.

Unraveling the dynamics of protein interactions with quantitative mass spectrometry.

Ramisetty SR, Washburn MP.

Crit Rev Biochem Mol Biol. 2011 Jun;46(3):216-28. doi: 10.3109/10409238.2011.567244. Epub 2011 Mar 26. Review.

PMID:
21438726
6.

Subunit architecture of intact protein complexes from mass spectrometry and homology modeling.

Taverner T, Hernández H, Sharon M, Ruotolo BT, Matak-Vinković D, Devos D, Russell RB, Robinson CV.

Acc Chem Res. 2008 May;41(5):617-27. doi: 10.1021/ar700218q. Epub 2008 Mar 4.

PMID:
18314965
7.

Proteomic complex detection using sedimentation (ProCoDeS): screening for proteins in stable complexes and their candidate interaction partners.

Segura MP, Lilley KS, Dupree P.

Biochem Soc Trans. 2010 Aug;38(4):923-7. doi: 10.1042/BST0380923. Review.

PMID:
20658978
8.

Quantitative genome-wide genetic interaction screens reveal global epistatic relationships of protein complexes in Escherichia coli.

Babu M, Arnold R, Bundalovic-Torma C, Gagarinova A, Wong KS, Kumar A, Stewart G, Samanfar B, Aoki H, Wagih O, Vlasblom J, Phanse S, Lad K, Yeou Hsiung Yu A, Graham C, Jin K, Brown E, Golshani A, Kim P, Moreno-Hagelsieb G, Greenblatt J, Houry WA, Parkinson J, Emili A.

PLoS Genet. 2014 Feb 20;10(2):e1004120. doi: 10.1371/journal.pgen.1004120. eCollection 2014 Feb.

10.

Identifying protein complexes by affinity purification and mass spectrometry analysis in the rice blast fungus.

Liu W, Iliuk A, Tao A, Ding S.

Methods Mol Biol. 2011;722:157-66. doi: 10.1007/978-1-61779-040-9_11.

PMID:
21590419
11.

Native gel analysis of macromolecular protein complexes in cultured mammalian cells.

Munawar N, Olivero G, Jerman E, Doyle B, Streubel G, Wynne K, Bracken A, Cagney G.

Proteomics. 2015 Nov;15(21):3603-12. doi: 10.1002/pmic.201500045. Epub 2015 Aug 24.

PMID:
26223664
12.

MultiProtIdent: identifying proteins using database search and protein-protein interactions.

Huang HD, Lee TY, Wu LC, Lin FM, Juan HF, Horng JT, Tsou AP.

J Proteome Res. 2005 May-Jun;4(3):690-7.

PMID:
15952715
13.

Advances in the analysis of dynamic protein complexes by proteomics and data processing.

Schubert P, Hoffman MD, Sniatynski MJ, Kast J.

Anal Bioanal Chem. 2006 Oct;386(3):482-93. Epub 2006 Aug 25. Review.

PMID:
16933131
15.

Identification of protein complexes in Escherichia coli using sequential peptide affinity purification in combination with tandem mass spectrometry.

Babu M, Kagan O, Guo H, Greenblatt J, Emili A.

J Vis Exp. 2012 Nov 12;(69). pii: 4057. doi: 10.3791/4057.

16.

Micropreparative fractionation of the complexome by blue native continuous elution electrophoresis.

Huang KY, Filarsky M, Padula MP, Raftery MJ, Herbert BR, Wilkins MR.

Proteomics. 2009 May;9(9):2494-502. doi: 10.1002/pmic.200800525.

PMID:
19343713
17.

Proteomics-Based Analysis of Protein Complexes in Pluripotent Stem Cells and Cancer Biology.

Sudhir PR, Chen CH.

Int J Mol Sci. 2016 Mar 22;17(3):432. doi: 10.3390/ijms17030432. Review.

18.

Network-Based Analysis on Orthogonal Separation of Human Plasma Uncovers Distinct High Density Lipoprotein Complexes.

Li H, Gordon SM, Zhu X, Deng J, Swertfeger DK, Davidson WS, Lu LJ.

J Proteome Res. 2015 Aug 7;14(8):3082-94. doi: 10.1021/acs.jproteome.5b00419. Epub 2015 Jun 30.

PMID:
26057100
19.

The BioPlex Network: A Systematic Exploration of the Human Interactome.

Huttlin EL, Ting L, Bruckner RJ, Gebreab F, Gygi MP, Szpyt J, Tam S, Zarraga G, Colby G, Baltier K, Dong R, Guarani V, Vaites LP, Ordureau A, Rad R, Erickson BK, Wühr M, Chick J, Zhai B, Kolippakkam D, Mintseris J, Obar RA, Harris T, Artavanis-Tsakonas S, Sowa ME, De Camilli P, Paulo JA, Harper JW, Gygi SP.

Cell. 2015 Jul 16;162(2):425-40. doi: 10.1016/j.cell.2015.06.043.

20.

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