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Items: 1 to 20 of 47

1.

An automated framework for hypotheses generation using literature.

Abedi V, Zand R, Yeasin M, Faisal FE.

BioData Min. 2012 Aug 29;5(1):13. doi: 10.1186/1756-0381-5-13.

2.

Selected papers from the 13th Annual Bio-Ontologies Special Interest Group Meeting.

Soldatova LN, Sansone SA, Stephens SM, Shah NH.

J Biomed Semantics. 2011 May 17;2 Suppl 2:I1. doi: 10.1186/2041-1480-2-S2-I1.

3.

A comparative study of cells in inflammation, EAE and MS using biomedical literature data mining.

Palakal M, Bright J, Sebastian T, Hartanto S.

J Biomed Sci. 2007 Jan;14(1):67-85. Epub 2006 Nov 3. Review.

PMID:
17082901
4.

Literature mining, ontologies and information visualization for drug repurposing.

Andronis C, Sharma A, Virvilis V, Deftereos S, Persidis A.

Brief Bioinform. 2011 Jul;12(4):357-68. doi: 10.1093/bib/bbr005. Epub 2011 Jun 28. Review.

PMID:
21712342
5.

Network-based analysis reveals distinct association patterns in a semantic MEDLINE-based drug-disease-gene network.

Zhang Y, Tao C, Jiang G, Nair AA, Su J, Chute CG, Liu H.

J Biomed Semantics. 2014 Aug 6;5:33. doi: 10.1186/2041-1480-5-33. eCollection 2014.

6.

Proceedings of the Second Workshop on Theory meets Industry (Erwin-Schrödinger-Institute (ESI), Vienna, Austria, 12-14 June 2007).

Hafner J.

J Phys Condens Matter. 2008 Feb 13;20(6):060301. doi: 10.1088/0953-8984/20/06/060301. Epub 2008 Jan 24.

PMID:
21693862
7.

Semantic data integration and knowledge management to represent biological network associations.

Losko S, Heumann K.

Methods Mol Biol. 2009;563:241-58. doi: 10.1007/978-1-60761-175-2_13.

PMID:
19597789
8.

Using statistical and knowledge-based approaches for literature-based discovery.

Yetisgen-Yildiz M, Pratt W.

J Biomed Inform. 2006 Dec;39(6):600-11. Epub 2006 Jan 4.

9.

Beyond the data deluge: data integration and bio-ontologies.

Blake JA, Bult CJ.

J Biomed Inform. 2006 Jun;39(3):314-20. Epub 2006 Feb 21.

10.

Extraction of human kinase mutations from literature, databases and genotyping studies.

Krallinger M, Izarzugaza JM, Rodriguez-Penagos C, Valencia A.

BMC Bioinformatics. 2009 Aug 27;10 Suppl 8:S1. doi: 10.1186/1471-2105-10-S8-S1.

11.

SysBioMed report: advancing systems biology for medical applications.

Wolkenhauer O, Fell D, De Meyts P, Blüthgen N, Herzel H, Le Novère N, Höfer T, Schürrle K, van Leeuwen I.

IET Syst Biol. 2009 May;3(3):131-6. doi: 10.1049/iet-syb.2009.0005.

PMID:
19449974
12.

NeuroRDF: semantic integration of highly curated data to prioritize biomarker candidates in Alzheimer's disease.

Iyappan A, Kawalia SB, Raschka T, Hofmann-Apitius M, Senger P.

J Biomed Semantics. 2016 Jul 8;7:45. doi: 10.1186/s13326-016-0079-8.

13.

Multi-way association extraction and visualization from biological text documents using hyper-graphs: applications to genetic association studies for diseases.

Mukhopadhyay S, Palakal M, Maddu K.

Artif Intell Med. 2010 Jul;49(3):145-54. doi: 10.1016/j.artmed.2010.03.002. Epub 2010 Apr 9.

PMID:
20382004
14.

Empirical study using network of semantically related associations in bridging the knowledge gap.

Abedi V, Yeasin M, Zand R.

J Transl Med. 2014 Nov 27;12:324. doi: 10.1186/s12967-014-0324-9.

15.

Effects of short-term exposure to air pollution on hospital admissions of young children for acute lower respiratory infections in Ho Chi Minh City, Vietnam.

HEI Collaborative Working Group on Air Pollution, Poverty, and Health in Ho Chi Minh City, Le TG, Ngo L, Mehta S, Do VD, Thach TQ, Vu XD, Nguyen DT, Cohen A.

Res Rep Health Eff Inst. 2012 Jun;(169):5-72; discussion 73-83.

PMID:
22849236
16.

Health-related quality of life in early breast cancer.

Groenvold M.

Dan Med Bull. 2010 Sep;57(9):B4184.

PMID:
20816024
17.

Biomedical literature mining: challenges and solutions in the 'omics' era.

Chaussabel D.

Am J Pharmacogenomics. 2004;4(6):383-93.

PMID:
15651899
18.

Reasoning with bio-ontologies: using relational closure rules to enable practical querying.

Blondé W, Mironov V, Venkatesan A, Antezana E, De Baets B, Kuiper M.

Bioinformatics. 2011 Jun 1;27(11):1562-8. doi: 10.1093/bioinformatics/btr164. Epub 2011 Apr 5.

PMID:
21471019
19.

Effects of long-term exposure to traffic-related air pollution on respiratory and cardiovascular mortality in the Netherlands: the NLCS-AIR study.

Brunekreef B, Beelen R, Hoek G, Schouten L, Bausch-Goldbohm S, Fischer P, Armstrong B, Hughes E, Jerrett M, van den Brandt P.

Res Rep Health Eff Inst. 2009 Mar;(139):5-71; discussion 73-89.

PMID:
19554969
20.

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