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Items: 1 to 20 of 157

1.

Ultra-high resolution HLA genotyping and allele discovery by highly multiplexed cDNA amplicon pyrosequencing.

Lank SM, Golbach BA, Creager HM, Wiseman RW, Keskin DB, Reinherz EL, Brusic V, O'Connor DH.

BMC Genomics. 2012 Aug 6;13:378. doi: 10.1186/1471-2164-13-378.

2.

A novel single cDNA amplicon pyrosequencing method for high-throughput, cost-effective sequence-based HLA class I genotyping.

Lank SM, Wiseman RW, Dudley DM, O'Connor DH.

Hum Immunol. 2010 Oct;71(10):1011-7. doi: 10.1016/j.humimm.2010.07.012. Epub 2010 Jul 30.

3.

A multi-site study using high-resolution HLA genotyping by next generation sequencing.

Holcomb CL, Höglund B, Anderson MW, Blake LA, Böhme I, Egholm M, Ferriola D, Gabriel C, Gelber SE, Goodridge D, Hawbecker S, Klein R, Ladner M, Lind C, Monos D, Pando MJ, Pröll J, Sayer DC, Schmitz-Agheguian G, Simen BB, Thiele B, Trachtenberg EA, Tyan DB, Wassmuth R, White S, Erlich HA.

Tissue Antigens. 2011 Mar;77(3):206-17. doi: 10.1111/j.1399-0039.2010.01606.x.

4.

HLA class II DRB high resolution genotyping by pyrosequencing: comparison of group specific PCR and pyrosequencing primers.

Ringquist S, Alexander AM, Styche A, Pecoraro C, Rudert WA, Trucco M.

Hum Immunol. 2004 Feb;65(2):163-74.

PMID:
14969771
5.

High-resolution, high-throughput HLA genotyping by next-generation sequencing.

Bentley G, Higuchi R, Hoglund B, Goodridge D, Sayer D, Trachtenberg EA, Erlich HA.

Tissue Antigens. 2009 Nov;74(5):393-403. doi: 10.1111/j.1399-0039.2009.01345.x.

6.

Very high resolution single pass HLA genotyping using amplicon sequencing on the 454 next generation DNA sequencers: Comparison with Sanger sequencing.

Yamamoto F, Höglund B, Fernandez-Vina M, Tyan D, Rastrou M, Williams T, Moonsamy P, Goodridge D, Anderson M, Erlich HA, Holcomb CL.

Hum Immunol. 2015 Dec;76(12):910-6. doi: 10.1016/j.humimm.2015.05.002. Epub 2015 May 30.

PMID:
26037172
7.

Application of High-Throughput Next-Generation Sequencing for HLA Typing on Buccal Extracted DNA: Results from over 10,000 Donor Recruitment Samples.

Yin Y, Lan JH, Nguyen D, Valenzuela N, Takemura P, Bolon YT, Springer B, Saito K, Zheng Y, Hague T, Pasztor A, Horvath G, Rigo K, Reed EF, Zhang Q.

PLoS One. 2016 Oct 31;11(10):e0165810. doi: 10.1371/journal.pone.0165810. eCollection 2016.

8.

High throughput HLA genotyping using 454 sequencing and the Fluidigm Access Array™ System for simplified amplicon library preparation.

Moonsamy PV, Williams T, Bonella P, Holcomb CL, Höglund BN, Hillman G, Goodridge D, Turenchalk GS, Blake LA, Daigle DA, Simen BB, Hamilton A, May AP, Erlich HA.

Tissue Antigens. 2013 Mar;81(3):141-9. doi: 10.1111/tan.12071.

PMID:
23398507
9.

2.7 million samples genotyped for HLA by next generation sequencing: lessons learned.

Schöfl G, Lang K, Quenzel P, Böhme I, Sauter J, Hofmann JA, Pingel J, Schmidt AH, Lange V.

BMC Genomics. 2017 Feb 14;18(1):161. doi: 10.1186/s12864-017-3575-z.

10.

Unambiguous high resolution genotyping of human leukocyte antigens.

Bradshaw RA, Dunn PPJ.

J Immunol Methods. 2017 Jun;445:10-14. doi: 10.1016/j.jim.2017.02.011. Epub 2017 Feb 24.

PMID:
28238798
11.

Cost-efficient multiplex PCR for routine genotyping of up to nine classical HLA loci in a single analytical run of multiple samples by next generation sequencing.

Ozaki Y, Suzuki S, Kashiwase K, Shigenari A, Okudaira Y, Ito S, Masuya A, Azuma F, Yabe T, Morishima S, Mitsunaga S, Satake M, Ota M, Morishima Y, Kulski JK, Saito K, Inoko H, Shiina T.

BMC Genomics. 2015 Apr 18;16:318. doi: 10.1186/s12864-015-1514-4.

12.

High-throughput multiplex HLA genotyping by next-generation sequencing using multi-locus individual tagging.

Ehrenberg PK, Geretz A, Baldwin KM, Apps R, Polonis VR, Robb ML, Kim JH, Michael NL, Thomas R.

BMC Genomics. 2014 Oct 6;15:864. doi: 10.1186/1471-2164-15-864.

13.
14.

Concordance of next generation sequence-based and sequence specific oligonucleotide probe-based HLA-DRB1 genotyping.

Lane JA, Johnson JR, Noble JA.

Hum Immunol. 2015 Dec;76(12):939-44. doi: 10.1016/j.humimm.2015.07.235. Epub 2015 Aug 4.

15.

New strategies for efficient typing of HLA class-II loci DQB1 and DRB1 by using Pyrosequencing.

Entz P, Toliat MR, Hampe J, Valentonyte R, Jenisch S, Nürnberg P, Nagy M.

Tissue Antigens. 2005 Jan;65(1):67-80.

PMID:
15663743
16.

An integrated genotyping approach for HLA and other complex genetic systems.

Nelson WC, Pyo CW, Vogan D, Wang R, Pyon YS, Hennessey C, Smith A, Pereira S, Ishitani A, Geraghty DE.

Hum Immunol. 2015 Dec;76(12):928-38. doi: 10.1016/j.humimm.2015.05.001. Epub 2015 May 28.

17.
18.

Next-generation sequencing can reveal in vitro-generated PCR crossover products: some artifactual sequences correspond to HLA alleles in the IMGT/HLA database.

Holcomb CL, Rastrou M, Williams TC, Goodridge D, Lazaro AM, Tilanus M, Erlich HA.

Tissue Antigens. 2014 Jan;83(1):32-40. doi: 10.1111/tan.12269.

PMID:
24355006
19.

High-throughput, high-fidelity HLA genotyping with deep sequencing.

Wang C, Krishnakumar S, Wilhelmy J, Babrzadeh F, Stepanyan L, Su LF, Levinson D, Fernandez-Viña MA, Davis RW, Davis MM, Mindrinos M.

Proc Natl Acad Sci U S A. 2012 May 29;109(22):8676-81. doi: 10.1073/pnas.1206614109. Epub 2012 May 15.

20.

High-resolution HLA-DRB typing using denaturing gradient gel electrophoresis and direct sequencing.

Knapp LA, Lehmann E, Hennes L, Eberle ME, Watkins DI.

Tissue Antigens. 1997 Aug;50(2):170-7.

PMID:
9271827

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