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Items: 1 to 20 of 126


Noise-mean relationship in mutated promoters.

Hornung G, Bar-Ziv R, Rosin D, Tokuriki N, Tawfik DS, Oren M, Barkai N.

Genome Res. 2012 Dec;22(12):2409-17. doi: 10.1101/gr.139378.112. Epub 2012 Jul 20.


Transcription factor binding site positioning in yeast: proximal promoter motifs characterize TATA-less promoters.

Erb I, van Nimwegen E.

PLoS One. 2011;6(9):e24279. doi: 10.1371/journal.pone.0024279. Epub 2011 Sep 9.


Precise nucleosome positioning and the TATA box dictate requirements for the histone H4 tail and the bromodomain factor Bdf1.

Martinez-Campa C, Politis P, Moreau JL, Kent N, Goodall J, Mellor J, Goding CR.

Mol Cell. 2004 Jul 2;15(1):69-81.


TATA is a modular component of synthetic promoters.

Mogno I, Vallania F, Mitra RD, Cohen BA.

Genome Res. 2010 Oct;20(10):1391-7. doi: 10.1101/gr.106732.110. Epub 2010 Jul 13.


Post-TATA binding protein recruitment clearance of Gcn5-dependent histone acetylation within promoter nucleosomes.

Topalidou I, Papamichos-Chronakis M, Thireos G.

Mol Cell Biol. 2003 Nov;23(21):7809-17.


Hyperacetylation of chromatin at the ADH2 promoter allows Adr1 to bind in repressed conditions.

Verdone L, Wu J, van Riper K, Kacherovsky N, Vogelauer M, Young ET, Grunstein M, Di Mauro E, Caserta M.

EMBO J. 2002 Mar 1;21(5):1101-11.


Mediator, TATA-binding protein, and RNA polymerase II contribute to low histone occupancy at active gene promoters in yeast.

Ansari SA, Paul E, Sommer S, Lieleg C, He Q, Daly AZ, Rode KA, Barber WT, Ellis LC, LaPorta E, Orzechowski AM, Taylor E, Reeb T, Wong J, Korber P, Morse RH.

J Biol Chem. 2014 May 23;289(21):14981-95. doi: 10.1074/jbc.M113.529354. Epub 2014 Apr 11. Erratum in: J Biol Chem. 2016 May 6;291(19):9938.


The effect of an intervening promoter nucleosome on gene expression.

Parikh RY, Kim HD.

PLoS One. 2013 May 20;8(5):e63072. doi: 10.1371/journal.pone.0063072. Print 2013.


Roles of transcription factor Mot3 and chromatin in repression of the hypoxic gene ANB1 in yeast.

Kastaniotis AJ, Mennella TA, Konrad C, Torres AM, Zitomer RS.

Mol Cell Biol. 2000 Oct;20(19):7088-98.


Promoter-specific activation defects by a novel yeast TBP mutant compromised for TFIIB interaction.

Virbasius CM, Holstege FC, Young RA, Green MR.

Curr Biol. 2001 Nov 13;11(22):1794-8.


A Random Screen Using a Novel Reporter Assay System Reveals a Set of Sequences That Are Preferred as the TATA or TATA-Like Elements in the CYC1 Promoter of Saccharomyces cerevisiae.

Watanabe K, Yabe M, Kasahara K, Kokubo T.

PLoS One. 2015 Jun 5;10(6):e0129357. doi: 10.1371/journal.pone.0129357. eCollection 2015.

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