Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 115

1.

AID/APOBEC deaminases disfavor modified cytosines implicated in DNA demethylation.

Nabel CS, Jia H, Ye Y, Shen L, Goldschmidt HL, Stivers JT, Zhang Y, Kohli RM.

Nat Chem Biol. 2012 Sep;8(9):751-8. doi: 10.1038/nchembio.1042. Epub 2012 Jul 8.

2.

[Oxidation and deamination of nucleobases as an epigenetic tool].

Guz J, Jurgowiak M, Oliński R.

Postepy Hig Med Dosw (Online). 2012 May 24;66:275-86. Review. Polish.

3.

Family-Wide Comparative Analysis of Cytidine and Methylcytidine Deamination by Eleven Human APOBEC Proteins.

Ito F, Fu Y, Kao SA, Yang H, Chen XS.

J Mol Biol. 2017 Jun 16;429(12):1787-1799. doi: 10.1016/j.jmb.2017.04.021. Epub 2017 May 4.

PMID:
28479091
4.

Nucleic acid determinants for selective deamination of DNA over RNA by activation-induced deaminase.

Nabel CS, Lee JW, Wang LC, Kohli RM.

Proc Natl Acad Sci U S A. 2013 Aug 27;110(35):14225-30. doi: 10.1073/pnas.1306345110. Epub 2013 Aug 13.

5.

APOBEC3A efficiently deaminates methylated, but not TET-oxidized, cytosine bases in DNA.

Schutsky EK, Nabel CS, Davis AKF, DeNizio JE, Kohli RM.

Nucleic Acids Res. 2017 Jul 27;45(13):7655-7665. doi: 10.1093/nar/gkx345.

6.

Epigenetic reprogramming: is deamination key to active DNA demethylation?

Teperek-Tkacz M, Pasque V, Gentsch G, Ferguson-Smith AC.

Reproduction. 2011 Nov;142(5):621-32. doi: 10.1530/REP-11-0148. Epub 2011 Sep 12. Review.

7.

Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain.

Guo JU, Su Y, Zhong C, Ming GL, Song H.

Cell. 2011 Apr 29;145(3):423-34. doi: 10.1016/j.cell.2011.03.022. Epub 2011 Apr 14.

8.

In vitro deamination of cytosine to uracil in single-stranded DNA by apolipoprotein B editing complex catalytic subunit 1 (APOBEC1).

Petersen-Mahrt SK, Neuberger MS.

J Biol Chem. 2003 May 30;278(22):19583-6. Epub 2003 Apr 14.

9.

DNA deamination in immunity: AID in the context of its APOBEC relatives.

Conticello SG, Langlois MA, Yang Z, Neuberger MS.

Adv Immunol. 2007;94:37-73. Review.

PMID:
17560271
10.

Comparison of the differential context-dependence of DNA deamination by APOBEC enzymes: correlation with mutation spectra in vivo.

Beale RC, Petersen-Mahrt SK, Watt IN, Harris RS, Rada C, Neuberger MS.

J Mol Biol. 2004 Mar 26;337(3):585-96.

PMID:
15019779
11.

Efficient deamination of 5-methylcytosines in DNA by human APOBEC3A, but not by AID or APOBEC3G.

Wijesinghe P, Bhagwat AS.

Nucleic Acids Res. 2012 Oct;40(18):9206-17. doi: 10.1093/nar/gks685. Epub 2012 Jul 13.

12.

A high-throughput assay for DNA deaminases.

Wang M, Rada C, Neuberger MS.

Methods Mol Biol. 2011;718:171-84. doi: 10.1007/978-1-61779-018-8_11.

PMID:
21370049
13.

APOBEC-mediated editing of viral RNA.

Bishop KN, Holmes RK, Sheehy AM, Malim MH.

Science. 2004 Jul 30;305(5684):645.

14.

Local chromatin microenvironment determines DNMT activity: from DNA methyltransferase to DNA demethylase or DNA dehydroxymethylase.

van der Wijst MG, Venkiteswaran M, Chen H, Xu GL, Plösch T, Rots MG.

Epigenetics. 2015;10(8):671-6. doi: 10.1080/15592294.2015.1062204. Review.

15.

AID expression in B-cell lymphomas causes accumulation of genomic uracil and a distinct AID mutational signature.

Pettersen HS, Galashevskaya A, Doseth B, Sousa MM, Sarno A, Visnes T, Aas PA, Liabakk NB, Slupphaug G, Sætrom P, Kavli B, Krokan HE.

DNA Repair (Amst). 2015 Jan;25:60-71. doi: 10.1016/j.dnarep.2014.11.006. Epub 2014 Nov 24.

16.

DNA demethylation pathways: Additional players and regulators.

Bochtler M, Kolano A, Xu GL.

Bioessays. 2017 Jan;39(1):1-13. doi: 10.1002/bies.201600178. Epub 2016 Nov 16. Review.

PMID:
27859411
17.

The APOBEC-2 crystal structure and functional implications for the deaminase AID.

Prochnow C, Bransteitter R, Klein MG, Goodman MF, Chen XS.

Nature. 2007 Jan 25;445(7126):447-51. Epub 2006 Dec 24.

PMID:
17187054
18.

Activation-induced cytidine deaminase deaminates 5-methylcytosine in DNA and is expressed in pluripotent tissues: implications for epigenetic reprogramming.

Morgan HD, Dean W, Coker HA, Reik W, Petersen-Mahrt SK.

J Biol Chem. 2004 Dec 10;279(50):52353-60. Epub 2004 Sep 24.

19.

Replication protein A (RPA) hampers the processive action of APOBEC3G cytosine deaminase on single-stranded DNA.

Lada AG, Waisertreiger IS, Grabow CE, Prakash A, Borgstahl GE, Rogozin IB, Pavlov YI.

PLoS One. 2011;6(9):e24848. doi: 10.1371/journal.pone.0024848. Epub 2011 Sep 15.

20.

DNA Editing by APOBECs: A Genomic Preserver and Transformer.

Knisbacher BA, Gerber D, Levanon EY.

Trends Genet. 2016 Jan;32(1):16-28. doi: 10.1016/j.tig.2015.10.005. Epub 2015 Nov 20. Review.

PMID:
26608778

Supplemental Content

Support Center