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Items: 1 to 20 of 121

1.

Global patterns of tissue-specific alternative polyadenylation in Drosophila.

Smibert P, Miura P, Westholm JO, Shenker S, May G, Duff MO, Zhang D, Eads BD, Carlson J, Brown JB, Eisman RC, Andrews J, Kaufman T, Cherbas P, Celniker SE, Graveley BR, Lai EC.

Cell Rep. 2012 Mar 29;1(3):277-89. Erratum in: Cell Rep. 2013 Mar 28;3(3):969.

2.

Comparative RNA-Seq analysis reveals pervasive tissue-specific alternative polyadenylation in Caenorhabditis elegans intestine and muscles.

Blazie SM, Babb C, Wilky H, Rawls A, Park JG, Mangone M.

BMC Biol. 2015 Jan 20;13:4. doi: 10.1186/s12915-015-0116-6.

3.

Widespread and extensive lengthening of 3' UTRs in the mammalian brain.

Miura P, Shenker S, Andreu-Agullo C, Westholm JO, Lai EC.

Genome Res. 2013 May;23(5):812-25. doi: 10.1101/gr.146886.112. Epub 2013 Mar 21.

4.

Neural-specific elongation of 3' UTRs during Drosophila development.

Hilgers V, Perry MW, Hendrix D, Stark A, Levine M, Haley B.

Proc Natl Acad Sci U S A. 2011 Sep 20;108(38):15864-9. doi: 10.1073/pnas.1112672108. Epub 2011 Sep 6.

5.

Ubiquitously transcribed genes use alternative polyadenylation to achieve tissue-specific expression.

Lianoglou S, Garg V, Yang JL, Leslie CS, Mayr C.

Genes Dev. 2013 Nov 1;27(21):2380-96. doi: 10.1101/gad.229328.113. Epub 2013 Oct 21.

6.

Implications of polyadenylation in health and disease.

Curinha A, Oliveira Braz S, Pereira-Castro I, Cruz A, Moreira A.

Nucleus. 2014;5(6):508-19. doi: 10.4161/nucl.36360. Epub 2014 Oct 31. Review.

7.

5'-UTR mediated translational control of splicing assembly factor RNP-4F expression during development of the Drosophila central nervous system.

Chen J, Yang JT, Doctor DL, Rawlins BA, Shields BC, Vaughn JC.

Gene. 2013 Oct 10;528(2):154-62. doi: 10.1016/j.gene.2013.07.027. Epub 2013 Jul 25.

PMID:
23892091
8.

Genome-wide analysis of pre-mRNA 3' end processing reveals a decisive role of human cleavage factor I in the regulation of 3' UTR length.

Martin G, Gruber AR, Keller W, Zavolan M.

Cell Rep. 2012 Jun 28;1(6):753-63. doi: 10.1016/j.celrep.2012.05.003. Epub 2012 Jun 7.

9.

Evolution of Hox post-transcriptional regulation by alternative polyadenylation and microRNA modulation within 12 Drosophila genomes.

Patraquim P, Warnefors M, Alonso CR.

Mol Biol Evol. 2011 Sep;28(9):2453-60. doi: 10.1093/molbev/msr073. Epub 2011 Mar 24.

PMID:
21436120
10.

Alternative polyadenylation in the nervous system: to what lengths will 3' UTR extensions take us?

Miura P, Sanfilippo P, Shenker S, Lai EC.

Bioessays. 2014 Aug;36(8):766-77. doi: 10.1002/bies.201300174. Epub 2014 Jun 5. Review.

11.
12.

PAPERCLIP Identifies MicroRNA Targets and a Role of CstF64/64tau in Promoting Non-canonical poly(A) Site Usage.

Hwang HW, Park CY, Goodarzi H, Fak JJ, Mele A, Moore MJ, Saito Y, Darnell RB.

Cell Rep. 2016 Apr 12;15(2):423-35. doi: 10.1016/j.celrep.2016.03.023. Epub 2016 Mar 31.

13.

Similarities and differences of polyadenylation signals in human and fly.

Retelska D, Iseli C, Bucher P, Jongeneel CV, Naef F.

BMC Genomics. 2006 Jul 12;7:176.

14.

Alternative polyadenylation signals and promoters act in concert to control tissue-specific expression of the Opitz Syndrome gene MID1.

Winter J, Kunath M, Roepcke S, Krause S, Schneider R, Schweiger S.

BMC Mol Biol. 2007 Nov 15;8:105.

15.

Characterization of a MEN1 ortholog from Drosophila melanogaster.

Guru SC, Prasad NB, Shin EJ, Hemavathy K, Lu J, Ip YT, Agarwal SK, Marx SJ, Spiegel AM, Collins FS, Oliver B, Chandrasekharappa SC.

Gene. 2001 Jan 24;263(1-2):31-8.

PMID:
11223240
16.
17.

Elevated levels of the polyadenylation factor CstF 64 enhance formation of the 1kB Testis brain RNA-binding protein (TB-RBP) mRNA in male germ cells.

Chennathukuzhi VM, Lefrancois S, Morales CR, Syed V, Hecht NB.

Mol Reprod Dev. 2001 Apr;58(4):460-9.

PMID:
11241784
18.

ELAV mediates 3' UTR extension in the Drosophila nervous system.

Hilgers V, Lemke SB, Levine M.

Genes Dev. 2012 Oct 15;26(20):2259-64. doi: 10.1101/gad.199653.112. Epub 2012 Sep 27.

19.

Diversity and dynamics of the Drosophila transcriptome.

Brown JB, Boley N, Eisman R, May GE, Stoiber MH, Duff MO, Booth BW, Wen J, Park S, Suzuki AM, Wan KH, Yu C, Zhang D, Carlson JW, Cherbas L, Eads BD, Miller D, Mockaitis K, Roberts J, Davis CA, Frise E, Hammonds AS, Olson S, Shenker S, Sturgill D, Samsonova AA, Weiszmann R, Robinson G, Hernandez J, Andrews J, Bickel PJ, Carninci P, Cherbas P, Gingeras TR, Hoskins RA, Kaufman TC, Lai EC, Oliver B, Perrimon N, Graveley BR, Celniker SE.

Nature. 2014 Aug 28;512(7515):393-9.

20.

Functional analysis of sequence motifs involved in the polyadenylation of Trichomonas vaginalis mRNAs.

Fuentes V, Barrera G, Sánchez J, Hernández R, López-Villaseñor I.

Eukaryot Cell. 2012 Jun;11(6):725-34. doi: 10.1128/EC.05322-11. Epub 2012 Mar 30.

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