Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 73

1.

Deep annotation of mouse iso-miR and iso-moR variation.

Zhou H, Arcila ML, Li Z, Lee EJ, Henzler C, Liu J, Rana TM, Kosik KS.

Nucleic Acids Res. 2012 Jul;40(13):5864-75. doi: 10.1093/nar/gks247. Epub 2012 Mar 19.

2.

A central role for the primary microRNA stem in guiding the position and efficiency of Drosha processing of a viral pri-miRNA.

Burke JM, Kelenis DP, Kincaid RP, Sullivan CS.

RNA. 2014 Jul;20(7):1068-77. doi: 10.1261/rna.044537.114. Epub 2014 May 22.

3.

Distinctive profile of IsomiR expression and novel microRNAs in rat heart left ventricle.

McGahon MK, Yarham JM, Daly A, Guduric-Fuchs J, Ferguson LJ, Simpson DA, Collins A.

PLoS One. 2013 Jun 14;8(6):e65809. doi: 10.1371/journal.pone.0065809. Print 2013.

4.

TRBP alters human precursor microRNA processing in vitro.

Lee HY, Doudna JA.

RNA. 2012 Nov;18(11):2012-9. doi: 10.1261/rna.035501.112. Epub 2012 Sep 24.

5.

pre-miRNA profiles obtained through application of locked nucleic acids and deep sequencing reveals complex 5'/3' arm variation including concomitant cleavage and polyuridylation patterns.

Burroughs AM, Kawano M, Ando Y, Daub CO, Hayashizaki Y.

Nucleic Acids Res. 2012 Feb;40(4):1424-37. doi: 10.1093/nar/gkr903. Epub 2011 Nov 3.

6.

Sequence features of Drosha and Dicer cleavage sites affect the complexity of isomiRs.

Starega-Roslan J, Witkos TM, Galka-Marciniak P, Krzyzosiak WJ.

Int J Mol Sci. 2015 Apr 10;16(4):8110-27. doi: 10.3390/ijms16048110.

7.

Deep sequencing of microRNA precursors reveals extensive 3' end modification.

Newman MA, Mani V, Hammond SM.

RNA. 2011 Oct;17(10):1795-803. doi: 10.1261/rna.2713611. Epub 2011 Aug 17.

8.

Improved annotation of C. elegans microRNAs by deep sequencing reveals structures associated with processing by Drosha and Dicer.

Warf MB, Johnson WE, Bass BL.

RNA. 2011 Apr;17(4):563-77. doi: 10.1261/rna.2432311. Epub 2011 Feb 9.

9.

Global identification of target recognition and cleavage by the Microprocessor in human ES cells.

Seong Y, Lim DH, Kim A, Seo JH, Lee YS, Song H, Kwon YS.

Nucleic Acids Res. 2014 Nov 10;42(20):12806-21. doi: 10.1093/nar/gku957. Epub 2014 Oct 17.

10.

Nucleotide sequence of miRNA precursor contributes to cleavage site selection by Dicer.

Starega-Roslan J, Galka-Marciniak P, Krzyzosiak WJ.

Nucleic Acids Res. 2015 Dec 15;43(22):10939-51. doi: 10.1093/nar/gkv968. Epub 2015 Sep 30.

11.

Recognition and cleavage of primary microRNA precursors by the nuclear processing enzyme Drosha.

Zeng Y, Yi R, Cullen BR.

EMBO J. 2005 Jan 12;24(1):138-48. Epub 2004 Nov 25.

12.

miRdentify: high stringency miRNA predictor identifies several novel animal miRNAs.

Hansen TB, Venø MT, Kjems J, Damgaard CK.

Nucleic Acids Res. 2014;42(16):e124. doi: 10.1093/nar/gku598. Epub 2014 Jul 22.

13.

PHDcleav: a SVM based method for predicting human Dicer cleavage sites using sequence and secondary structure of miRNA precursors.

Ahmed F, Kaundal R, Raghava GP.

BMC Bioinformatics. 2013;14 Suppl 14:S9. doi: 10.1186/1471-2105-14-S14-S9. Epub 2013 Oct 9.

14.

RNA editing of the microRNA-151 precursor blocks cleavage by the Dicer-TRBP complex.

Kawahara Y, Zinshteyn B, Chendrimada TP, Shiekhattar R, Nishikura K.

EMBO Rep. 2007 Aug;8(8):763-9. Epub 2007 Jun 22.

15.

Genome-wide annotation of microRNA primary transcript structures reveals novel regulatory mechanisms.

Chang TC, Pertea M, Lee S, Salzberg SL, Mendell JT.

Genome Res. 2015 Sep;25(9):1401-9. doi: 10.1101/gr.193607.115.

16.

Deep-sequencing of endothelial cells exposed to hypoxia reveals the complexity of known and novel microRNAs.

Voellenkle C, Rooij Jv, Guffanti A, Brini E, Fasanaro P, Isaia E, Croft L, David M, Capogrossi MC, Moles A, Felsani A, Martelli F.

RNA. 2012 Mar;18(3):472-84. doi: 10.1261/rna.027615.111. Epub 2012 Jan 26.

17.

Loop-miRs: active microRNAs generated from single-stranded loop regions.

Winter J, Link S, Witzigmann D, Hildenbrand C, Previti C, Diederichs S.

Nucleic Acids Res. 2013 May 1;41(10):5503-12. doi: 10.1093/nar/gkt251. Epub 2013 Apr 10.

18.

Prediction of guide strand of microRNAs from its sequence and secondary structure.

Ahmed F, Ansari HR, Raghava GP.

BMC Bioinformatics. 2009 Apr 9;10:105. doi: 10.1186/1471-2105-10-105.

19.

Dynamic isomiR regulation in Drosophila development.

Fernandez-Valverde SL, Taft RJ, Mattick JS.

RNA. 2010 Oct;16(10):1881-8. doi: 10.1261/rna.2379610. Epub 2010 Aug 30.

20.

Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing.

Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS.

BMC Plant Biol. 2011 Jan 10;11:5. doi: 10.1186/1471-2229-11-5.

Supplemental Content

Support Center