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Items: 1 to 20 of 122

1.

Comparison of insertional RNA editing in Myxomycetes.

Chen C, Frankhouser D, Bundschuh R.

PLoS Comput Biol. 2012;8(2):e1002400. doi: 10.1371/journal.pcbi.1002400. Epub 2012 Feb 23.

2.

Insertional editing of mitochondrial tRNAs of Physarum polycephalum and Didymium nigripes.

Antes T, Costandy H, Mahendran R, Spottswood M, Miller D.

Mol Cell Biol. 1998 Dec;18(12):7521-7.

3.

RNA editing is absent in a single mitochondrial gene of Didymium iridis.

Hendrickson PG, Silliker ME.

Mycologia. 2010 Nov-Dec;102(6):1288-94. doi: 10.3852/10-019. Epub 2010 Apr 26.

PMID:
20943545
4.

Evolution of RNA editing sites in the mitochondrial small subunit rRNA of the Myxomycota.

Krishnan U, Barsamian A, Miller DL.

Methods Enzymol. 2007;424:197-220.

PMID:
17662842
5.

RNA editing in six mitochondrial ribosomal protein genes of Didymium iridis.

Hendrickson PG, Silliker ME.

Curr Genet. 2010 Jun;56(3):203-13. doi: 10.1007/s00294-010-0292-4. Epub 2010 Feb 19.

PMID:
20169440
6.

Computational approaches to insertional RNA editing.

Bundschuh R.

Methods Enzymol. 2007;424:173-95.

PMID:
17662841
7.

RNA editing of 10 Didymium iridis mitochondrial genes and comparison with the homologous genes in Physarum polycephalum.

Traphagen SJ, Dimarco MJ, Silliker ME.

RNA. 2010 Apr;16(4):828-38. doi: 10.1261/rna.1989310. Epub 2010 Feb 16.

8.

Complete characterization of the edited transcriptome of the mitochondrion of Physarum polycephalum using deep sequencing of RNA.

Bundschuh R, Altmüller J, Becker C, Nürnberg P, Gott JM.

Nucleic Acids Res. 2011 Aug;39(14):6044-55. doi: 10.1093/nar/gkr180. Epub 2011 Apr 8.

9.

RNA editing in Physarum mitochondria: assays and biochemical approaches.

Byrne EM, Visomirski-Robic L, Cheng YW, Rhee AC, Gott JM.

Methods Enzymol. 2007;424:143-72.

PMID:
17662840
10.

RNA editing by cytidine insertion in mitochondria of Physarum polycephalum.

Mahendran R, Spottswood MR, Miller DL.

Nature. 1991 Jan 31;349(6308):434-8.

PMID:
1825131
11.

Evolution of four types of RNA editing in myxomycetes.

Horton TL, Landweber LF.

RNA. 2000 Oct;6(10):1339-46.

12.

Editing of the mitochondrial small subunit rRNA in Physarum polycephalum.

Mahendran R, Spottswood MS, Ghate A, Ling ML, Jeng K, Miller DL.

EMBO J. 1994 Jan 1;13(1):232-40. Erratum in: EMBO J 1994 Mar 15;13(6):1493.

13.

Rewriting the information in DNA: RNA editing in kinetoplastids and myxomycetes.

Horton TL, Landweber LF.

Curr Opin Microbiol. 2002 Dec;5(6):620-6. Review.

PMID:
12457708
14.
15.

Discovery of new genes and deletion editing in Physarum mitochondria enabled by a novel algorithm for finding edited mRNAs.

Gott JM, Parimi N, Bundschuh R.

Nucleic Acids Res. 2005 Sep 7;33(16):5063-72. Print 2005.

16.

Model for codon position bias in RNA editing.

Liu T, Bundschuh R.

Phys Rev Lett. 2005 Aug 19;95(8):088101. Epub 2005 Aug 18.

PMID:
16196905
17.
18.

Computational prediction of RNA editing sites.

Bundschuh R.

Bioinformatics. 2004 Nov 22;20(17):3214-20. Epub 2004 Jul 1.

PMID:
15231535
19.
20.

Insertional editing of nascent mitochondrial RNAs in Physarum.

Visomirski-Robic LM, Gott JM.

Proc Natl Acad Sci U S A. 1997 Apr 29;94(9):4324-9.

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